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Going Viral
Bioconductor software package (programming)
Titz B et al.The open source software R / Bioconductor is used for statistical analysis and visualization, with continual generation of new analysis packages and updates. Find the latest research on programming and Bioconductor here.
Top 20 most recent papers
Orchestrating single-cell analysis with Bioconductor
Nature MethodsDecember 2, 2019
Robert A AmezquitaStephanie C. Hicks
233
1
RCy3: Network biology using Cytoscape from within R
F1000ResearchOctober 18, 2019
Julia Anne GustavsenAlex Pico
ACTOR: a latent Dirichlet model to compare expressed isoform proportions to a reference panel
bioRxivNovember 26, 2019
Sean D. McCabeMichael I. Love
36
Epiviz File Server: Query, Transform and Interactively Explore Data from Indexed Genomic Files
bioRxivDecember 5, 2019
Jayaram KancherlaHéctor Corrada Bravo
7
An epigenetic clock for human skeletal muscle
bioRxivNovember 11, 2019
Sarah VoisinNir Eynon
59
PIPE-T: a new Galaxy tool for the analysis of RT-qPCR expression data
Scientific ReportsNovember 26, 2019
Nicolò ZanardiDavide Cangelosi
1
AlphaBeta: Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants
bioRxivDecember 2, 2019
Yadollah ShahryaryFrank Johannes
22
clustifyr: An R package for automated single-cell RNA sequencing cluster classification
bioRxivNovember 26, 2019
Rui FuKent A. Riemondy
55
Set-based differential covariance testing for genomics
Stat : the ISI's Journal for Rapid Dissemination of Statistics ResearchAugust 6, 2019
Yi-Hui Zhou
HVEM has a broader expression than PD-L1 and constitutes a negative prognostic marker and potential treatment target for melanoma
OncoimmunologySeptember 25, 2019
Nausicaa MalissenDaniel Olive
2
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Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer
Journal of CancerOctober 6, 2019
Bo ChenJian-Qing Wu
Estimation of Eosinophil Cells in Cord Blood with References Based on Blood in Adults via Bayesian Measurement Error Modeling
BioinformaticsNovember 9, 2019
Yu JiangWilfried Joachim Jurgen Karmaus
8
1
Identification of differentially expressed lncRNAs and mRNAs in luminal-B breast cancer by RNA-sequencing
BMC CancerDecember 3, 2019
Cheng-Liang YuanYing-Ying Liu
EpiDISH web server: Epigenetic Dissection of Intra-Sample-Heterogeneity with online GUI
BioinformaticsNovember 9, 2019
Shijie C ZhengAndrew Erich Teschendorff
3
1
LINC00511 as a ceRNA promotes cell malignant behaviors and correlates with prognosis of hepatocellular carcinoma patients by modulating miR-195/EYA1 axis
Biomedicine & Pharmacotherapy = Biomédecine & PharmacothérapieNovember 12, 2019
Wen-Yu HuRui E Feng
2
Identification of potential hub genes associated with the pathogenesis and prognosis of pancreatic duct adenocarcinoma using bioinformatics meta-analysis of multi-platform datasets
Oncology LettersDecember 1, 2019
Yufan MaXiao-Wei Tang
Cerebro: Interactive visualization of scRNA-seq data
BioinformaticsNovember 25, 2019
Roman HilljeLucilla Luzi
5
Copy Number Variation Mapping and Genomic Variation of Autochthonous and Commercial Turkey Populations
Frontiers in GeneticsOctober 29, 2019
Maria Giuseppina StrillacciAlessandro Bagnato
Study on miRNAs in Pan-Cancer of the Digestive Tract Based on the Illumina HiSeq System Data Sequencing
BioMed Research InternationalOctober 15, 2019
Chun-Hui LaiJiang-Hui Zeng
Dual oxidase 1 and NADPH oxidase 2 exert favorable effects in cervical cancer patients by activating immune response
BMC CancerNovember 9, 2019
Sang Yeon ChoHyuk Soo Eun
3