Bioconductor software package (programming)

The open source software R / Bioconductor is used for statistical analysis and visualization, with continual generation of new analysis packages and updates. Find the latest research on programming and Bioconductor here.

February 24, 2021

Single-Cell RNA Sequencing Analysis of the Drosophila Larval Ventral Cord.

Current Protocols
Tho Huu NguyenMihaela Serpe
February 23, 2021
Open Access

Identification of a Metastasis-Associated Gene Signature of Clear Cell Renal Cell Carcinoma.

Frontiers in Genetics
Suhua GaoFengmin Shao
February 23, 2021

Genomic Epidemiology Analysis of Infectious Disease Outbreaks Using TransPhylo.

Current Protocols
Xavier DidelotNoel McCarthy
February 23, 2021

A variable selection approach for highly correlated predictors in high-dimensional genomic data.

Bioinformatics
Wencan ZhuNils Ternès
February 21, 2021
Open Access

Grouping of genomic markers in populations with family structure.

BMC Bioinformatics
Dörte WittenburgJan Klosa
February 19, 2021

Assembly and Exploration of a Single Cell Atlas of the Drosophila Larval Ventral Cord. Identification of Rare Cell Types.

Current Protocols
Rosario VicidominiMihaela Serpe
February 18, 2021

IRIS-FGM: an integrative single-cell RNA-Seq interpretation system for functional gene module analysis.

Bioinformatics
Yuzhou ChangQin Ma
February 17, 2021
Open Access

GCA: an R package for genetic connectedness analysis using pedigree and genomic data.

BMC Genomics
Haipeng Yu, Gota Morota
February 17, 2021
Open Access

WHSC1/NSD2 regulates immune infiltration in prostate cancer.

Journal for Immunotherapy of Cancer
Muzamil Y WantSebastiano Battaglia
February 17, 2021

RADSex: a computational workflow to study sex determination using Restriction Site-Associated DNA Sequencing data.

Molecular Ecology Resources
Romain FeronYann Guiguen
February 17, 2021
Open Access

sangeranalyseR: simple and Interactive Processing of Sanger Sequencing Data in R.

Genome Biology and Evolution
Kuan-Hao ChaoRobert Lanfear
February 14, 2021
Open Access

rePROBE: Workflow for Revised Probe Assignment and Updated Probe-set Annotation in Microarrays.

Genomics, Proteomics & Bioinformatics
Frieder HadlichKlaus Wimmers
February 13, 2021
Open Access

DIscBIO: A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics.

International Journal of Molecular Sciences
Salim GhannoumAlvaro Köhn-Luque
February 8, 2021
Preprint
Open Access

ORFhunteR: an accurate approach for the automatic identification and annotation of open reading frames in human mRNA molecules

BioRxiv : the Preprint Server for Biology
V. V. GrinevPetr V Nazarov
February 6, 2021
Open Access

Characterizing Highly Cited Papers in Mass Cytometry through H-Classics.

Biology
Daniel E Di Zeo-SánchezM Isabel Lucena
February 3, 2021
Preprint
Open Access

SplicingFactory - Splicing diversity analysis for transcriptome data

BioRxiv : the Preprint Server for Biology
P. SzikoraEndre Sebestyen
February 2, 2021
Review

Network pharmacology assessment of Qingkailing injection treatment of cholestatic hepatitis.

Journal of Traditional Chinese Medicine = Chung I Tsa Chih Ying Wen Pan
Yajun LianXueqian Wang
February 2, 2021
Open Access

Exon-level estimates improve the detection of differentially expressed genes in RNA-seq studies.

RNA Biology
Arfa MehmoodLaura L Elo

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