Bioconductor software package (programming)

The open source software R / Bioconductor is used for statistical analysis and visualization, with continual generation of new analysis packages and updates. Find the latest research on programming and Bioconductor here.

May 12, 2020
Open Access

PenDA, a rank-based method for personalized differential analysis: Application to lung cancer

PLoS Computational Biology
Magali RichardDaniel Jost
July 2, 2020
Review
Open Access

Bibliometric Analysis of Research on Telomere Length in Children: A Review of Scientific Literature

International Journal of Environmental Research and Public Health
Desirée Valera-GranEva-María Navarrete-Muñoz
May 22, 2020

CELLector: Genomics-Guided Selection of Cancer In Vitro Models

Cell Systems
Hanna NajgebauerFrancesco Iorio
May 12, 2020
Open Access

Expression of mRNAs, miRNAs, and lncRNAs in Human Trabecular Meshwork Cells Upon Mechanical Stretch

Investigative Ophthalmology & Visual Science
Hannah YoungbloodYutao Liu
July 7, 2020
Open Access

Fast computation of genome-metagenome interaction effects

Algorithms for Molecular Biology : AMB
Florent GuinotChristophe Ambroise
May 22, 2020

Spathial: an R package for the evolutionary analysis of biological data

Bioinformatics
Erika GardiniAndrea Cavalli
June 13, 2020
Open Access

Fluent genomics with  plyranges  and  tximeta

F1000Research
Stuart LeeMichael I Love
June 24, 2020

Programmatic access to bacterial regulatory networks with regutools

Bioinformatics
Joselyn ChávezAlejandro Reyes
May 21, 2020
Open Access

fcScan: a versatile tool to cluster combinations of sites using genomic coordinates

BMC Bioinformatics
Abdullah El-KurdiPierre Khoueiry
April 30, 2020

Cytokine Gene Expression Alterations in Human Macrophages Infected by Leishmania major

Cell Journal
Khodaberdi KalaviSeyed Javad Mowla
May 26, 2020
Open Access

PACVr: plastome assembly coverage visualization in R

BMC Bioinformatics
Michael Gruenstaeudl, Nils Jenke
July 4, 2020

Epiviz File Server: Query, Transform and Interactively Explore Data from Indexed Genomic Files

Bioinformatics
Jayaram KancherlaHector Corrada Bravo
July 6, 2020
Preprint

Compression of quantification uncertainty for scRNA-seq counts

BioRxiv : the Preprint Server for Biology
S. Van BurenMichael I Love
July 1, 2020
Open Access

NASQAR: a web-based platform for high-throughput sequencing data analysis and visualization

BMC Bioinformatics
Ayman YousifKristin C Gunsalus

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