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Cancer Genomics (Preprints)

Cancer Genomics (Preprints)   diagram by Alemar et al, PLOS One
Alemar et al, PLOS One

Cancer genomics employ high-throughput technologies to identify the complete catalog of somatic alterations that characterize the genome, transcriptome and epigenome of cohorts of tumor samples. Discover the latest preprints here.

Top 20 most recent papers
bioRxiv

Cell autonomous versus systemic Akt isoform deletions uncovered new roles for Akt1 and Akt2 in breast cancer

bioRxivJanuary 8, 2020
Nissim HayMaxim V Frolov
4
bioRxiv

Circadian Rhythm Is Disrupted by ZNF704 in Breast Carcinogenesis

bioRxivJanuary 9, 2020
Chao YangYongfeng Shang
5
bioRxiv

Downregulation of both mismatch repair and non-homologous end-joining pathways in hypoxic brain tumour cell lines

bioRxivJanuary 15, 2020
Sophie CowmanViolaine See
4
bioRxiv

ARID2 deficiency promotes tumor progression and is associated with higher sensitivity to PARP inhibition in lung cancer

bioRxivJanuary 10, 2020
Thaidy MorenoIgnacio Varela
4
bioRxiv

Bayesian non-parametric clustering of single-cell mutation profiles

bioRxivJanuary 15, 2020
Nico BorgsmuellerNiko Beerenwinkel
22
bioRxiv

Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture

bioRxivDecember 30, 2019
Aseda TenaFrederick W. Alt
5
bioRxiv

Gene size matters: What determines gene length in the human genome?

bioRxivJanuary 10, 2020
Inês LopesJoao Pedro de Magalhaes
67
bioRxiv

Pan-cancer landscape of homologous recombination deficiency

bioRxivJanuary 14, 2020
Luan NguyenEdwin Cuppen
57
bioRxiv

Overcoming Genetic Drop-outs in Variants-based Lineage Tracing from Single-cell RNA Sequencing Data

bioRxivJanuary 2, 2020
Tianshi LuTao Wang
8
bioRxiv

MSIsensor-pro: fast, accurate and matched-normal-sample-free detection of microsatellite instability

bioRxivJanuary 9, 2020
Peng JiaKai Ye
6
bioRxiv

Longitudinal whole-exome sequencing of cell-free DNA unravels the metastatic evolutionary dynamics of BRCA2 mutated breast cancer

bioRxivJanuary 10, 2020
Robert K HastingsJacqueline A Shaw
15
bioRxiv

A multi-layered systems approach for renal cell carcinoma

bioRxivJanuary 14, 2020
Lindsay CooleyAndreas Bikfalvi
14
bioRxiv

Expression-Based Inference of Cancer Metabolic Flux Differences

bioRxivJanuary 9, 2020
Yiping Wang, Zhenglong Gu
3
bioRxiv

In silico analyses reveal new putative Breast Cancer RNA-binding proteins

bioRxivJanuary 9, 2020
Santiago GuerreroCesar Paz-y-Mino
40
bioRxiv

A hierarchical clustering and data fusion approach for disease subtype discovery

bioRxivJanuary 17, 2020
Bastian Pfeifer, Michael G. Schimek
4
bioRxiv

Surveying Brain Tumor Heterogeneity by Single-Cell RNA Sequencing of Multi-sector Biopsies

bioRxivJanuary 19, 2020
Kai YuXiao-Dong Su
9
bioRxiv

Intratumor Heterogeneity and Evolution of Colorectal Cancer

bioRxivJanuary 19, 2020
Santasree BanerjeeXin Liu
5
bioRxiv

Accuracy and Reproducibility of Somatic Point Mutation Calling in Clinical-Type Targeted Sequencing Data

bioRxivDecember 31, 2019
Ali KarimnezhadTheodore J. Perkins
7
bioRxiv

A statistical approach for tracking clonal dynamics in cancer using longitudinal next-generation sequencing data

bioRxivJanuary 21, 2020
Dimitrios V VavoulisAnna Schuh
bioRxiv

Accucopy: accurate and fast inference of allele-specific copy number alterations for heterogeneous tumor samples from high-throughput sequencing data

bioRxivJanuary 3, 2020
Xinping FanYu Huang
8

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