Cell Atlas of the Human Eye

Constructing a cell atlas of the human eye will require transcriptomic and histologic analysis over the lifespan. This understanding will aid in the study of development and disease. Find the latest research pertaining to the Cell Atlas of the Human Eye here.

March 3, 2020
Preprint
Open Access

Combined analysis of single cell RNA-Seq and ATAC-Seq data reveals regulatory toggles operating in native and iPS-derived retina.

BioRxiv : the Preprint Server for Biology
Anouk GeorgesMichel Georges
July 23, 2020

Corneal epithelial biology: Lessons stemming from old to new

Experimental Eye Research
Robert M LavkerHan Peng
September 12, 2019
Open Access

Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data

F1000Research
J. Javier Diaz-MejiaJohn H. Morris
July 23, 2019
Preprint
Open Access

Single-cell profiles of retinal neurons differing in resilience to injury reveal neuroprotective genes

BioRxiv : the Preprint Server for Biology
Nicholas M TranJoshua R Sanes
February 4, 2020
Preprint
Open Access

Cell Atlas of Aqueous Humor Outflow Pathways in Eyes of Humans and Four Model Species Provides Insights into Glaucoma Pathogenesis

BioRxiv : the Preprint Server for Biology
Tavé van ZylJoshua R Sanes
September 29, 2019
Open Access

Urothelial organoids originating from Cd49fhigh mouse stem cells display Notch-dependent differentiation capacity

Nature Communications
Catarina P SantosFrancisco X Real
September 14, 2019
Open Access

Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data

F1000Research
J. Javier Diaz-MejiaJohn H. Morris
February 16, 2020
Open Access

Epithelial Vegfa Specifies a Distinct Endothelial Population in the Mouse Lung

Developmental Cell
Lisandra Vila EllisJichao Chen
February 6, 2020
Open Access

Single-Cell Transcriptomic Comparison of Human Fetal Retina, hPSC-Derived Retinal Organoids, and Long-Term Retinal Cultures

Cell Reports
Akshayalakshmi SridharThomas A Reh
October 2, 2019
Preprint
Open Access

Single-cell analysis of human retina identifies evolutionarily conserved and species-specific mechanisms controlling development.

BioRxiv : the Preprint Server for Biology
Yufeng LuBrian S Clark
February 27, 2020
Preprint
Open Access

RNA-seq and scRNA-seq reveal trajectory progression of the retinal ganglion cell lineage in wild-type and Atoh7-null retinas

BioRxiv : the Preprint Server for Biology
Fuguo WuXiuqian Mu
May 13, 2020
Open Access

Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis

Nature Communications
Xiangjie LiMingyao Li
August 3, 2020
Open Access

Two new genetically modified mouse alleles labeling distinct phases of retinal ganglion cell development by fluorescent proteins

Developmental Dynamics : an Official Publication of the American Association of Anatomists
Yichen GeXiuqian Mu
July 24, 2020
Open Access

Different lineage contexts direct common pro-neural factors to specify distinct retinal cell subtypes

The Journal of Cell Biology
Mei WangJie He
June 20, 2020
Open Access

Cell Atlas of The Human Fovea and Peripheral Retina

Scientific Reports
Wenjun YanJoshua R Sanes
March 11, 2020
Preprint
Open Access

MOLECULAR IDENTIFICATION OF SIXTY-THREE AMACRINE CELL TYPES COMPLETES A MOUSE RETINAL CELL ATLAS

BioRxiv : the Preprint Server for Biology
Wenjun YanJoshua R Sanes
December 20, 2019
Open Access

Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics

BioRxiv : the Preprint Server for Biology
Carmen Bravo González-BlasStein Aerts
December 2, 2019

Single-Cell Capture, RNA-seq, and Transcriptome Analysis from the Neural Retina

Methods in Molecular Biology
Rachayata DharmatRui Chen
July 30, 2019
Preprint
Open Access

Cross-species transcriptomic and epigenomic analysis reveals key regulators of injury response and neuronal regeneration in vertebrate retinas.

BioRxiv : the Preprint Server for Biology
Thanh HoangSeth Blackshaw

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