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CZI Human Cell Atlas Seed Network

CZI Human Cell Atlas Seed Network diagram by Boloc et al, PLOS One
Boloc et al, PLOS One

The aim of the Human Cell Atlas (HCA) is to build reference maps of all human cells in order to enhance our understanding of health and disease. The Seed Networks for the HCA project aims to bring together collaborators with different areas of expertise in order to facilitate the development of the HCA. Find the latest research from members of the HCA Seed Networks here.

Top 20 most recent papers
Science

Chromatin accessibility dynamics in a model of human forebrain development

ScienceJanuary 25, 2020
Alexandro E TrevinoSergiu P Pașca
2
1
Cell

Widespread Transcriptional Scanning in the Testis Modulates Gene Evolution Rates

CellJanuary 25, 2020
Bo XiaItai Yanai
382
17
1
1
1
bioRxiv

Metabolic and Epigenomic Regulation of Th17/Treg Balance by the Polyamine Pathway

bioRxivJanuary 23, 2020
Chao WangVijay K Kuchroo
Annals of Oncology : Official Journal of the European Society for Medical Oncology

A meta-analysis of the accuracy of a neuroendocrine tumor mRNA genomic biomarker (NETest) in blood

Annals of Oncology : Official Journal of the European Society for Medical OncologyJanuary 22, 2020
K ÖbergS Paulson
2
Nature Methods

Galaxy External Display Applications: closing a dataflow interoperability loop

Nature MethodsJanuary 22, 2020
Daniel BlankenbergNate Coraor
22
bioRxiv

Clustered γ-Protocadherins Regulate Cortical Interneuron Programmed Cell Death.

bioRxivJanuary 15, 2020
Walter R Mancia LeonArturo Alvarez-Buylla
7
Nature Communications

Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs

Nature CommunicationsJanuary 25, 2020
Emily E BurkeAndrew E Jaffe
36
bioRxiv

In Silico Modeling of Metabolic State in Single Th17 Cells Reveals Novel Regulators of Inflammation and Autoimmunity

bioRxivJanuary 24, 2020
Allon WagnerNir Yosef
Trends in Biotechnology

Enabling Technologies for Personalized and Precision Medicine

Trends in BiotechnologyJanuary 26, 2020
Dean HoAli Zarrinpar
Science

Lineage tracing on transcriptional landscapes links state to fate during differentiation

ScienceJanuary 25, 2020
Caleb WeinrebAllon M Klein
1
bioRxiv

Polyamine Metabolism Regulates the T Cell Epigenome Through Hypusination

bioRxivJanuary 25, 2020
Daniel J PulestonErika L Pearce
bioRxiv

Reduced PABPN1 levels causes cytoskeleton disorganization and aberrant differentiation

bioRxivJanuary 15, 2020
Vered RazBenedikt Kessler
3
bioRxiv

AAV Ablates Neurogenesis in the Adult Murine Hippocampus

bioRxivJanuary 19, 2020
Stephen T JohnstonMatthew Shtrahman
172
Cell Stem Cell

Zika Virus Targets Glioblastoma Stem Cells through a SOX2-Integrin αv β5 Axis

Cell Stem CellJanuary 21, 2020
Zhe ZhuJeremy N Rich
40
5
bioRxiv

A Bayesian nonparametric semi-supervised model for integration of multiple single-cell experiments

bioRxivJanuary 15, 2020
Archit Verma, Barbara E Engelhardt
53
bioRxiv

Transient Commensal Clonal Interactions Can Drive Tumor Metastasis

bioRxivJanuary 16, 2020
Suha Naffar-Abu AmaraJoan S S. Brugge
6
Nature Methods

Publisher Correction: Analysis of the Human Protein Atlas Image Classification competition

Nature MethodsJanuary 24, 2020
Wei OuyangEmma Lundberg
bioRxiv

Proteogenomic single cell analysis of skeletal muscle myocytes

bioRxivJanuary 24, 2020
Katherin M FomchenkoMarc K. Halushka
Nature Biotechnology

Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas

Nature BiotechnologyJanuary 15, 2020
Reuben MoncadaItai Yanai
172
1
Nature Communications

A Wnt-mediated transformation of the bone marrow stromal cell identity orchestrates skeletal regeneration

Nature CommunicationsJanuary 18, 2020
Yuki MatsushitaNoriaki Ono
11
1

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