de novo Genome Assembly

Despite advances in DNA sequencing technology, assembly of complex genomes remains a major challenge, particularly for genomes sequenced using short reads, which yield highly fragmented assemblies. Here is the latest research on de novo genome assembly.

January 12, 2021
Open Access

The complete chloroplast genome sequence of the Alstroemeria hybrid variety 'Hanhera'

Mitochondrial DNA. Part B, Resources
Jong-Bo KimTae-Ho Park
January 19, 2021
Open Access

The complete mitochondrial genome of Luffa acutangula

Mitochondrial DNA. Part B, Resources
Panthita Ruang-AreerateSithichoke Tangphatsornruang
January 13, 2021
Open Access

Bruchid beetle ovipositioning mediated defense responses in black gram pods

BMC Plant Biology
Debajit DasBidyut Kumar Sarmah
December 29, 2020

De novo assembly of the Mylia taylorii transcriptome and identification of sesquiterpene synthases.

Archives of Biochemistry and Biophysics
Xiaoguang YanJianjun Qiao
January 8, 2021
Open Access

Illumina short-read sequencing data, de novo assembly and annotations of the Drosophila nasuta nasuta genome

Data in Brief
Stafny DSouzaNallur Ramachandra
January 24, 2021
Open Access

Chromosome-Level Genome Assembly and Annotation of a Sciaenid Fish, Argyrosomus Japonicus.

Genome Biology and Evolution
Linlin ZhaoTianxiang Gao
January 23, 2021
Open Access

De Novo Transcriptome Sequencing of Rough Lemon Leaves (Citrus jambhiri Lush.) in Response to Plenodomus tracheiphilus Infection.

International Journal of Molecular Sciences
Riccardo RussoAngela Roberta Lo Piero
January 12, 2021

Integrated hybrid de novo assembly technologies to obtain high-quality pig genome using short and long reads

Briefings in Bioinformatics
Heng DuJian-Feng Liu
January 14, 2021

Transcriptome characterization and generation of marker resource for Himalayan vulnerable species, Ulmus wallichiana

Molecular Biology Reports
Amandeep SinghPankaj Bhardwaj
January 23, 2021
Preprint
Open Access

De novo genome assembly of the land snail Candidula unifasciata (Mollusca: Gastropoda)

BioRxiv : the Preprint Server for Biology
Luis Javier ChuecaM. Pfenninger
January 22, 2021
Open Access

De novo genome assembly of two tomato ancestors, solanum pimpinellifolium and S. lycopersicum var. cerasiforme, by long-read sequencing.

DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes
Hitomi TakeiTohru Ariizumi
January 9, 2021
Open Access

First report of fig mosaic virus on fig in Russia

Plant Disease
Sergei ChirkovFedor Sharko

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