Enzyme Evolution

This feed focuses on molecular models of enzyme evolution and new approaches (such as adaptive laboratory evolution) to metabolic engineering of microorganisms. Here is the latest research.

December 16, 2020
Open Access

Genome-scale determination of 5´ and 3´ boundaries of RNA transcripts in Streptomyces genomes

Scientific Data
Yongjae LeeByung-Kwan Cho
October 8, 2020
Open Access

Gastrointestinal Surgery for Inflammatory Bowel Disease Persistently Lowers Microbiome and Metabolome Diversity

Inflammatory Bowel Diseases
Xin FangBrigid S Boland
January 5, 2021
Review

Systems and synthetic biology to elucidate secondary metabolite biosynthetic gene clusters encoded in Streptomyces genomes

Natural Product Reports
Namil LeeByung-Kwan Cho
December 2, 2020
Preprint
Open Access

Prediction of Michaelis constants from structuralfeatures using deep learning

BioRxiv : the Preprint Server for Biology
A. KrollMartin Lercher
May 10, 2020
Open Access

Transcriptome and translatome profiles of Streptomyces species in different growth phases

Scientific Data
Woori KimByung-Kwan Cho
September 8, 2020
Review

Directed evolution of enzymes

Emerging Topics in Life Sciences
Fabio K Tamaki
July 31, 2020
Preprint
Open Access

MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kinetics

BioRxiv : the Preprint Server for Biology
Z. B. HaimanBernhard Palsson
July 9, 2020
Review
Open Access

Mini review: Genome mining approaches for the identification of secondary metabolite biosynthetic gene clusters in Streptomyces

Computational and Structural Biotechnology Journal
Namil LeeByung-Kwan Cho
November 20, 2020
Preprint
Open Access

Optimal density of biological cells

BioRxiv : the Preprint Server for Biology
T. Y. Pang, Martin Lercher
October 7, 2020
Open Access

Genome-scale metabolic models highlight stage-specific differences in essential metabolic pathways in Trypanosoma cruzi

PLoS Neglected Tropical Diseases
Isabel S ShiratsubakiJair L Siqueira-Neto
May 20, 2020
Preprint
Open Access

Laboratory evolution of multiple E. coli strains reveals unifying principles of adaptation but diversity in driving genotypes

BioRxiv : the Preprint Server for Biology
E. KavvasC. Long
December 23, 2020
Open Access

Blood donor exposome and impact of common drugs on red blood cell metabolism

JCI Insight
Travis NemkovAngelo D'Alessandro
September 20, 2020
Preprint
Open Access

Structure of autosynthetic models of balanced cell growth and numerical optimization of their growth rate

BioRxiv : the Preprint Server for Biology
Deniz SezerMartin Lercher
July 4, 2020
Open Access

Revealing 29 sets of independently modulated genes in Staphylococcus aureus , their regulators, and role in key physiological response

Proceedings of the National Academy of Sciences of the United States of America
Saugat PoudelBernhard Palsson
December 30, 2020

DeepTFactor: A deep learning-based tool for the prediction of transcription factors

Proceedings of the National Academy of Sciences of the United States of America
Gi Bae KimSang Yup Lee
September 23, 2020
Review

Reconstructing organisms in silico: genome-scale models and their emerging applications

Nature Reviews. Microbiology
Xin FangBernhard Palsson
May 7, 2020
Preprint
Open Access

Identifying the effect of vancomycin on HA-MRSA strains using bacteriological and physiological media

BioRxiv : the Preprint Server for Biology
Akanksha RajputBernhard Palsson
December 30, 2020
Review
Open Access

The Expanding Computational Toolbox for Engineering Microbial Phenotypes at the Genome Scale

Microorganisms
D. C. ZielinskiBernhard Palsson

Sign up to follow this feed and discover related papers.

Related Feeds

ATP Synthases

ATP synthases are enzymes located in the inner mitochondrial membrane that catalyze the synthesis of ATP during cellular respiration. Discover the latest research on ATP synthases here.

Ancient DNA

Ancient DNA sequences are able to offer valuable insights into molecular evolutionary processes, but are notoriously difficult to analyze due to molecular damage and exogenous dna contamination. Discover the latest research on Ancient DNA here.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Archaeogenetics

Recent advances in genomic sequencing has led to the discovery of new strains of Archaea and shed light on their evolutionary history. Discover the latest research on Archaeogenetics here.

Artificial Cell Models

This feed focuses on biomimetrics, synthetic biology and bio- and tissue-engineering approaches used for modeling human diseases.

Biophysics of CRISPR

This feed focuses on broad characteristics of the CRISPR system and the proteins associated with it.

Biosynthetic Transformations

Biosyntheic transformtions are multi-step, enzyme-catalyzed processes where substrates are converted into more complex products in living organisms. Simple compounds are modified, converted into other compounds, or joined together to form macromolecules. Discover the latest research on biosynthetic transformations here.

Cofactor Redox Enzymology

This feed focuses on structure and function of coenzymes in catalytic reactions, including cellular redox systems.

Comparative Sequencing

Inter/Intra-Species: Comparative Sequencing describes the sequencing techniques that compare between and within species genomes. Discover the latest research on comparative sequencing of inter/intra-species here.

Conservation Genomics

Conservation genomics aims to preserve the viability of populations and the biodiversity of living organisms through the use of genomic data. Discover the latest research on Conservation Genomics here.

© 2021 Meta ULC. All rights reserved
/feed-previews/enzyme-evolution/57db0847-8e99-4fa4-8f1c-440619251a5d