Enzyme Evolution

This feed focuses on molecular models of enzyme evolution and new approaches (such as adaptive laboratory evolution) to metabolic engineering of microorganisms. Here is the latest research.

March 3, 2020
Open Access

Machine learning with random subspace ensembles identifies antimicrobial resistance determinants from pan-genomes of three pathogens

PLoS Computational Biology
Jason C HyunBernhard O Palsson
May 10, 2020
Open Access

Transcriptome and translatome profiles of Streptomyces species in different growth phases

Scientific Data
Woori KimByung-Kwan Cho
March 15, 2020
Comment / Editorial
Open Access

Renaissance minds in 21st century science

Genome Biology
Itai Yanai, M. Lercher
April 22, 2020
Open Access

Multiplex secretome engineering enhances recombinant protein production and purity

Nature Communications
Stefan KolNathan E Lewis
March 20, 2020
Open Access

Revealing 29 sets of independently modulated genes in Staphylococcus aureus, their regulators and role in key physiological responses

BioRxiv : the Preprint Server for Biology
Saugat PoudelBernhard O Palsson
July 31, 2020
Open Access

MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kinetics

BioRxiv : the Preprint Server for Biology
Z. B. HaimanBernhard O Palsson
July 9, 2020
Open Access

Mini review: Genome mining approaches for the identification of secondary metabolite biosynthetic gene clusters in Streptomyces

Computational and Structural Biotechnology Journal
Namil LeeByung-Kwan Cho
May 20, 2020
Open Access

Laboratory evolution of multiple E. coli strains reveals unifying principles of adaptation but diversity in driving genotypes

BioRxiv : the Preprint Server for Biology
E. KavvasC. Long
March 27, 2020
Open Access

An atlas of human metabolism

Science Signaling
Jonathan L RobinsonJens Nielsen
March 8, 2020
Open Access

An analytical theory of balanced cellular growth

Nature Communications
Hugo Dourado, M. Lercher
July 4, 2020
Open Access

Revealing 29 sets of independently modulated genes in Staphylococcus aureus , their regulators, and role in key physiological response

Proceedings of the National Academy of Sciences of the United States of America
Saugat PoudelBernhard O Palsson
April 9, 2020
Open Access

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

Nature Biotechnology
Christian LievenCheng Zhang
May 7, 2020
Open Access

Identifying the effect of vancomycin on HA-MRSA strains using bacteriological and physiological media

BioRxiv : the Preprint Server for Biology
Akanksha RajputBernhard O Palsson
December 22, 2019
Open Access

A workflow for generating multi-strain genome-scale metabolic models of prokaryotes

Nature Protocols
Charles J NorsigianBernhard O Palsson
June 6, 2020

Microbial Synthesis of Human-Hormone Melatonin at Gram Scales

ACS Synthetic Biology
Hao LuoBernhard O Palsson
December 19, 2019
Open Access

Profiling the effect of nafcillin on HA-MRSA D712 using bacteriological and physiological media

Scientific Data
Akanksha RajputJoe Pogliano

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