European Bioinformatics Institute

European Bioinformatics Institute focuses both on data resource development and investigator-driven research in the field of bioinformatics. Follow this feed to stay up to date on research by this institute.

January 15, 2022

Cell2location maps fine-grained cell types in spatial transcriptomics.

Nature Biotechnology
Vitalii KleshchevnikovOmer Ali Bayraktar
January 15, 2022

Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO.

Nature Methods
Britta VeltenOliver Stegle
January 13, 2022

The impact of AlphaFold2 one year on.

Nature Methods
David T Jones, J. M. Thornton
January 13, 2022

A paradigm shift in structural biology.

Nature Methods
Sriram Subramaniam, Gerard Kleywegt
January 13, 2022

Benchmarking the empirical accuracy of short-read sequencing across the M. tuberculosis genome.

Bioinformatics
Maximillian MarinMaha Reda Farhat
January 12, 2022
Correction

Publisher Correction: A catalogue of 1,167 genomes from the human gut archaeome.

Nature Microbiology
Cynthia Maria ChibaniChristine Moissl-Eichinger
January 10, 2022
Preprint
Open Access

Estimation of the test to test distribution as a proxy for generation interval distribution for the Omicron variant in England

MedRxiv : the Preprint Server for Health Sciences
Sam AbbottS. Funk
January 8, 2022
Open Access

scDALI: modeling allelic heterogeneity in single cells reveals context-specific genetic regulation.

Genome Biology
Tobias HeinenOliver Stegle
January 3, 2022
Preprint
Open Access

The Gene Curation Coalition: A global effort to harmonize gene-disease evidence resources

MedRxiv : the Preprint Server for Health Sciences
M. T. DiStefano Wil
December 31, 2021

A catalogue of 1,167 genomes from the human gut archaeome.

Nature Microbiology
Cynthia Maria ChibaniChristine Moissl-Eichinger
December 26, 2021

Integrating cultivation and metagenomics for a multi-kingdom view of skin microbiome diversity and functions.

Nature Microbiology
Sara Saheb KashafRobert D Finn
December 21, 2021
Preprint
Open Access

The BioImage Archive - home of life-sciences microscopy data

BioRxiv : the Preprint Server for Biology
Matthew HartleyAlvis Brazma
December 21, 2021
Preprint
Open Access

Single-Cell Atlas of Common Variable Immunodeficiency reveals germinal center-associated epigenetic dysregulation in B cell responses

BioRxiv : the Preprint Server for Biology
J. Rodriguez-UbrevaEsteban Ballestar
December 19, 2021
Preprint
Open Access

Epithelial cells of the intestine acquire cell-intrinsic inflammation signatures during ageing

BioRxiv : the Preprint Server for Biology
M. C. FunkMichael Boutros
December 13, 2021
Preprint
Open Access

Conformational variation in enzyme catalysis: A structural study on catalytic residues

BioRxiv : the Preprint Server for Biology
Ioannis G. RiziotisJ. M. Thornton
December 12, 2021

RNA modifications detection by comparative Nanopore direct RNA sequencing.

Nature Communications
A. LegerTony Kouzarides
December 9, 2021
Preprint
Open Access

Large Scale Discovery of Microbial Fibrillar Adhesins and Identification of Novel Adhesive Domain Families

BioRxiv : the Preprint Server for Biology
Vivian Angela Monzon, Alex Bateman
December 7, 2021

Mendelian Randomization.

Cold Spring Harbor Perspectives in Medicine
Ewan Birney
December 7, 2021
Open Access

geneBasis: an iterative approach for unsupervised selection of targeted gene panels from scRNA-seq.

Genome Biology
A MissarovaJ C Marioni
December 2, 2021

The European Bioinformatics Institute (EMBL-EBI) in 2021.

Nucleic Acids Research
Gaia CantelliJohanna McEntyre

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