Human Tumor Atlas

The Human Tumor Atlas is a collaborative project that generates single-cell, multiparametric, and longitudinal maps of different cancers to investigate cancer development, metastasis, and treatments.

January 19, 2022
Preprint
Open Access

NestedBD: Bayesian Inference of Phylogenetic Trees From Single-Cell DNA Copy Number Profile Data Under a Birth-Death Model

BioRxiv : the Preprint Server for Biology
Y. LiuLuay Nakhleh
January 19, 2022

The SF3B1R625H mutation promotes prolactinoma tumor progression through aberrant splicing of DLG1.

Journal of Experimental & Clinical Cancer Research : CR
Jing GuoYazhuo Zhang
January 19, 2022

CD161 expression and regulation defines rapidly responding effector CD4+ T cells associated with improved survival in HPV16-associated tumors.

Journal for Immunotherapy of Cancer
Chantal L DuurlandSjoerd H van der Burg
January 19, 2022

Blocking autophagy overcomes resistance to dual histone deacetylase and proteasome inhibition in gynecologic cancer.

Cell Death & Disease
Jianling BiKimberly K Leslie
January 19, 2022

Characterization of RNF43 frameshift mutations that drive Wnt ligand- and R-spondin-dependent colon cancer.

The Journal of Pathology
Daisuke YamamotoMasanobu Oshima
January 19, 2022
Review

Spatial omics: Navigating to the golden era of cancer research.

Clinical and Translational Medicine
Yingcheng WuQiang Gao
January 18, 2022
Preprint
Open Access

Single cell profiling of γδ hepatosplenic T-cell lymphoma unravels tumor cell heterogeneity associated with disease progression

BioRxiv : the Preprint Server for Biology
W. SongRuoyu Zhang
January 18, 2022
Preprint
Open Access

Multiplexed imaging mass cytometry reveals distincttumor-immune microenvironments linked to immunotherapyresponses in melanoma

BioRxiv : the Preprint Server for Biology
X. XiaoRongshan Yu
January 18, 2022
Preprint
Open Access

Spatially resolved single-cell deconvolution of bulk RNA-seq using Bulk2Space

BioRxiv : the Preprint Server for Biology
J. LiaoXiaohui Fan
January 17, 2022
Preprint
Open Access

User-guided local and global copy-number segmentation for tumor sequencing data

BioRxiv : the Preprint Server for Biology
Z. LalaniMohammed El-Kebir
January 17, 2022

Identification of Rare Cell Populations in Autofluorescence Lifetime Image Data.

Cytometry. Part a : the Journal of the International Society for Analytical Cytology
Elizabeth Cardona, Alex J Walsh
January 17, 2022

A Robust Method for the Large-Scale Production of Spheroids for High-Content Screening and Analysis Applications.

Journal of Visualized Experiments : JoVE
Alannah S ChalkleyJeremy C Simpson
January 17, 2022

Culture of Bladder Cancer Organoids as Precision Medicine Tools.

Journal of Visualized Experiments : JoVE
Patrick B ThomasElizabeth D Williams

Sign up to follow this feed and discover related papers.

Related Feeds

Adipose Tissue Heterogeneity

Examining the genomics, transcriptomics, proteomics, and metabolomics of adipose tissue at the single cell level will help build a single cell atlas of these tissues, providing insights into how changes in the map underlie health and disease states. Discover the latest research on adipose tissue heterogeneity here.

Alignment-free Sequence Analysis Tools

Alignment-free sequence analyses have been applied to problems ranging from whole-genome phylogeny to the classification of protein families, identification of horizontally transferred genes, and detection of recombined sequences. Here is the latest research.

Apoptosis in Cancer

Apoptosis is an important mechanism in cancer. By evading apoptosis, tumors can continue to grow without regulation and metastasize systemically. Many therapies are evaluating the use of pro-apoptotic activation to eliminate cancer growth. Here is the latest research on apoptosis in cancer.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Artificial Chromosomes

Artificial chromosomes are genetically engineered chromosomes derived from the DNA of a species. Discover the latest research on artificial chromosomes here.

Atlas of Bone Marrow Hematopoiesis

Mapping bone marrow hematopoiesis by combining single-cell analyses and imaging techniques will facilitate the study of hematopoietic disease and the development of novel therapeutics. This feed includes new research on analysis of the bone marrow hematopoiesis by multiple approaches.

Autophagy & Metabolism

Autophagy preserves the health of cells and tissues by replacing outdated and damaged cellular components with fresh ones. In starvation, it provides an internal source of nutrients for energy generation and, thus, survival. A powerful promoter of metabolic homeostasis at both the cellular and whole-animal level, autophagy prevents degenerative diseases. It does have a downside, however--cancer cells exploit it to survive in nutrient-poor tumors.

Bioconductor Software Package: Human Cell Atlas

The open source software R / Bioconductor is used for statistical analysis and visualization, with continual generation of new analysis packages and updates. Find the latest research on single-cell and human cell atlas Bioconductor software packages here.

Biodiversity Data

Biodiversity refers to the variety and variability of life on Earth. Biodiversity is typically a measure of variation at the genetic, species, and ecosystem level.Discover the latest research on biodiversity data here.

Bioinformatics in Biomedicine

Bioinformatics in biomedicine incorporates computer science, biology, chemistry, medicine, mathematics and statistics. Discover the latest research on bioinformatics in biomedicine here.

© 2022 Meta ULC. All rights reserved
/feed-previews/human-tumor-atlas/9c0229a5-6d95-46ee-9b2d-39a1dd3f7aa7