A detailed expression map of the PIN1 auxin transporter in Arabidopsis thaliana root

BMC Plant Biology
N A OmelyanchukV V Mironova

Abstract

Theauxin efflux carrier PIN1 is a key mediator of polar auxin transport in developing plant tissues. This is why factors that are supposed to be involved in auxin distribution are frequently tested in the regulation of PIN1 expression. As a result, diverse aspects of PIN1 expression are dispersed across dozens of papers entirely devoted to other specific topics related to the auxin pathway. Integration of these puzzle pieces about PIN1 expression revealed that, along with a recurring pattern, some features of PIN1 expression varied from article to article. To determine if this uncertainty is related to the specific foci of articles or has a basis in the variability of PIN1 gene activity, we performed a comprehensive 3D analysis of PIN1 expression patterns in Arabidopsis thaliana roots. We provide here a detailed map of PIN1 expression in the primary root, in the lateral root primordia and at the root-shoot junction. The variability in PIN1 expression pattern observed in individual roots may occur due to differences in auxin distribution between plants. To simulate this effect, we analysed PIN1 expression in the roots from wild type seedlings treated with different IAA concentrations and pin mutants. Most changes in PIN1 express...Continue Reading

References

Dec 12, 2003·Developmental Cell·Ranjan Swarup, Malcolm Bennett
Apr 9, 2005·Trends in Plant Science·Ivan A PaponovKlaus Palme
Jul 1, 2005·Nature·Tomasz PaciorekJirí Friml
Apr 8, 2006·Science·Justyna WisniewskaJirí Friml
Oct 18, 2006·Genes & Development·Michael SauerEva Benková
Jan 24, 2007·The Plant Cell·Joshua J BlakesleeAngus S Murphy
Mar 17, 2007·Current Biology : CB·Raffaele Dello IoioSabrina Sabatini
May 1, 2008·Annual Review of Plant Biology·René Benjamins, Ben Scheres
Nov 27, 2008·Proceedings of the National Academy of Sciences of the United States of America·Franck Anicet DitengouKlaus Palme
Mar 17, 2009·Trends in Plant Science·Eva BenkováJoseph G Dubrovsky
Sep 25, 2009·PloS One·Alexandre TromasCatherine Perrot-Rechenmann
Jul 29, 2010·BMC Systems Biology·Victoria V MironovaVitaly A Likhoshvai
May 31, 2011·Current Biology : CB·Anthony BishoppYkä Helariutta
Dec 27, 2011·Molecular Plant·Michel Ruiz RosqueteJürgen Kleine-Vehn
May 29, 2012·Frontiers in Plant Science·Cristian ForestanSerena Varotto
Jun 30, 2012·Nature Methods·Johannes SchindelinAlbert Cardona
Nov 6, 2012·Trends in Plant Science·Victor B Ivanov, Joseph G Dubrovsky
Jan 15, 2014·The Plant Journal : for Cell and Molecular Biology·Thorsten SchmidtKlaus Palme
Feb 20, 2014·Physiologia Plantarum·Daniel Ioan PacurarCatherine Bellini
Jan 22, 2015·The Plant Cell·Maciek Adamowski, Jiří Friml

❮ Previous
Next ❯

Citations

Apr 19, 2016·Plant Signaling & Behavior·Federica Della RovereMaria Maddalena Altamura
Apr 21, 2017·Frontiers in Plant Science·Yuzhou ZhangGuanghui Xiao
Aug 15, 2019·Plant & Cell Physiology·Yong LiChuanzao Mao
Jul 15, 2020·Plant Signaling & Behavior·Sourabh Sengupta, Ronita Nag Chaudhuri
May 15, 2018·Frontiers in Plant Science·Antonio CanoJosé Manuel Pérez-Pérez
Apr 24, 2020·Frontiers in Plant Science·Ivan A PaponovKlaus Palme
Apr 2, 2020·Development·Nathan L MellorLeah R Band
Mar 2, 2019·Annual Review of Plant Biology·Urs FischerRishikesh P Bhalerao
Nov 17, 2020·Frontiers in Plant Science·Maria S SavinaViktoriya V Lavrekha
Jan 23, 2021·International Journal of Molecular Sciences·Csaba MáthéTamás Garda
Apr 4, 2021·International Journal of Molecular Sciences·Yun-Shil GhoKi-Hong Jung
Aug 4, 2021·Developmental Cell·Thea van den BergKirsten Ten Tusscher
Jun 5, 2021·The New Phytologist·Despina SamakovliPolydefkis Hatzopoulos

❮ Previous
Next ❯

Software Mentioned

iRoCS Toolbox
/ PlotProfile
ImageJ
iRoCs
analyse

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.