A Kalman Filtering Perspective for Multiatlas Segmentation

SIAM Journal on Imaging Sciences
Yi GaoAllen Tannenbaum

Abstract

In multiatlas segmentation, one typically registers several atlases to the novel image, and their respective segmented label images are transformed and fused to form the final segmentation. In this work, we provide a new dynamical system perspective for multiatlas segmentation, inspired by the following fact: The transformation that aligns the current atlas to the novel image can be not only computed by direct registration but also inferred from the transformation that aligns the previous atlas to the image together with the transformation between the two atlases. This process is similar to the global positioning system on a vehicle, which gets position by inquiring from the satellite and by employing the previous location and velocity-neither answer in isolation being perfect. To solve this problem, a dynamical system scheme is crucial to combine the two pieces of information; for example, a Kalman filtering scheme is used. Accordingly, in this work, a Kalman multiatlas segmentation is proposed to stabilize the global/affine registration step. The contributions of this work are twofold. First, it provides a new dynamical systematic perspective for standard independent multiatlas registrations, and it is solved by Kalman filter...Continue Reading

References

Jun 14, 2002·Cardiovascular Research·Pierre JaïsJacques Clémenty
May 17, 2006·Radiographics : a Review Publication of the Radiological Society of North America, Inc·Jens Vogel-ClaussenDavid A Bluemke
Jan 24, 2007·CA: a Cancer Journal for Clinicians·Ahmedin JemalMichael J Thun
Sep 4, 2007·Medical Image Analysis·Daniel J Blezek, James V Miller
Dec 21, 2007·IEEE Transactions on Medical Imaging·Mehdi Hedjazi Moghari, Purang Abolmaesumi
Feb 8, 2008·IEEE Transactions on Image Processing : a Publication of the IEEE Signal Processing Society·S HakerA Tannenbaum
Jan 10, 2009·IEEE Transactions on Medical Imaging·Ivana IsgumBram van Ginneken
Feb 21, 2009·IEEE Transactions on Medical Imaging·Xabier ArtaechevarriaCarlos Ortiz-de-Solorzano
Apr 2, 2009·IEEE Transactions on Medical Imaging·Mert R SabuncuPolina Golland
Oct 28, 2009·NeuroImage·Jyrki Mp LötjönenUNKNOWN Alzheimer's Disease Neuroimaging Initiative
Nov 20, 2009·IEEE Transactions on Medical Imaging·Stefan KleinJosien P W Pluim
Apr 14, 2010·Brain Research Bulletin·Jane S PaulsenUNKNOWN PREDICT-HD Investigators and Coordinators of the Huntington's Study Group (HSG)
Jun 10, 2010·IEEE Transactions on Medical Imaging·Yi GaoAllen Robert Tannenbaum
Jun 22, 2010·IEEE Transactions on Medical Imaging·Mert R SabuncuPolina Golland
Aug 7, 2010·Medical Image Analysis·Yangming OuChristos Davatzikos
Oct 8, 2011·NeuroImage·Mark JenkinsonStephen M Smith
Jun 27, 2012·IEEE Transactions on Pattern Analysis and Machine Intelligence·Hongzhi WangPaul A Yushkevich
Jul 4, 2012·IEEE Transactions on Image Processing : a Publication of the IEEE Signal Processing Society·Yi GaoAllen Tannenbaum
Nov 10, 2013·Academic Radiology·Jimit DoshiChristos Davatzikos

❮ Previous
Next ❯

Citations

Oct 24, 2017·Human Brain Mapping·Cheng ChangYi Gao

❮ Previous
Next ❯

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.

Related Papers

Information Processing in Medical Imaging : Proceedings of the ... Conference
Torsten RohlfingCalvin R Maurer
IEEE Transactions on Cybernetics
Pingkun YanPeter L Choyke
Conference Proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society
Jingbo MaSusumu Mori
Medical Image Analysis
Andrew J Asman, Bennett A Landman
© 2021 Meta ULC. All rights reserved