A Review of Tandem Mass Spectrometry Characterization of Adenosine Diphosphate-Ribosylated Peptides.

International Journal of Mass Spectrometry
Shawna M Hengel, David R Goodlett

Abstract

The use of tandem mass spectrometry to identify and characterize sites of protein adenosine diphosphate (ADP) ribosylation will be reviewed. Specifically, we will focus on data acquisition schemes and fragmentation techniques that provide peptide sequence and modification site information. Also discussed are uses of synthetic standards to aid characterization, and an enzymatic method that converts ADP-ribosylated peptides into ribosyl mono phosphorylated peptides making identification amenable to traditional phosphopeptide characterization methods. Finally the potential uses of these techniques to characterize poly ADP-ribosylation sites, and inherent challenges, are addressed.

References

Dec 1, 1988·Analytical Biochemistry·A J Furth
May 1, 1995·Analytical Biochemistry·G M ShahG G Poirier
Jul 1, 1994·Rapid Communications in Mass Spectrometry : RCM·A P Hunter, D E Games
Jun 13, 2002·Proceedings of the National Academy of Sciences of the United States of America·Gregorino PaoneJoel Moss
May 3, 2003·The EMBO Journal·Daniela Corda, Maria Di Girolamo
May 4, 2005·Cellular and Molecular Life Sciences : CMLS·J Diefenbach, A Bürkle
May 4, 2005·Cellular and Molecular Life Sciences : CMLS·E PetermannS L Oei
Sep 13, 2005·Trends in Molecular Medicine·Jean-François HainceGuy G Poirier
Aug 15, 2006·Structure·S Mariana MargaritC Erec Stebbins
Dec 17, 2008·Journal of the American Society for Mass Spectrometry·Shawna M HengelDavid R Goodlett
Jun 30, 2009·Analytical Biochemistry·Harumi OsagoMikako Tsuchiya
Sep 22, 2009·Journal of the American Chemical Society·Zhihua TaoHung-wen Liu
Nov 26, 2009·Analytical Chemistry·Barry M Zee, Benjamin A Garcia
Mar 18, 2010·Journal of the American Chemical Society·Gerbrand J van der Heden van NoortDmitri V Filippov
Jun 8, 2010·Nucleic Acids Research·Simon MessnerMichael O Hottiger
Jul 14, 2010·Rapid Communications in Mass Spectrometry : RCM·Shawna M HengelDavid R Goodlett
Oct 26, 2010·Journal of the American Chemical Society·Peter M Moyle, Tom W Muir
Sep 1, 1993·Journal of the American Society for Mass Spectrometry·M J HuddlestonS A Carr
Nov 1, 1994·Journal of the American Society for Mass Spectrometry·J K EngJ R Yates

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Citations

Aug 1, 2012·Nature Methods·Ivan MaticRonald T Hay
Oct 5, 2013·Histochemistry and Cell Biology·Daniel L WinterZhenlin Li
Jun 13, 2014·Journal of Proteome Research·Casey M DanielsAnthony K L Leung
Dec 17, 2015·Scientific Reports·Casey M DanielsAnthony K L Leung
Sep 30, 2014·Proteomics·Christina A Vivelo, Anthony K L Leung
Jun 20, 2015·Molecular Cell·Casey M DanielsAnthony K L Leung
May 4, 2013·The FEBS Journal·Karla L H FeijsBernhard Lüscher
May 29, 2015·Journal of Bioinformatics and Computational Biology·Jun LiuHongqiang Lv
Jul 28, 2015·Journal of Proteome Research·Florian RosenthalMichael O Hottiger
Aug 21, 2013·Nature Methods·Yajie ZhangYonghao Yu
Apr 26, 2013·Organic Letters·Hans A V KistemakerDmitri V Filippov
Oct 1, 2016·Nature Communications·Rita MartelloMichael L Nielsen
Oct 25, 2016·Nature Chemical Biology·Orsolya LeideckerIvan Matic
Jun 30, 2018·EMBO Reports·Deena M Leslie PedrioliMichael O Hottiger
May 19, 2017·Nucleic Acids Research·Juan J BonfiglioIvan Matic
Nov 4, 2020·Journal of the American Society for Mass Spectrometry·Peter M GehrigMichael O Hottiger
Jan 13, 2018·Biochemistry·Yuanli Zhen, Yonghao Yu

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