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A robust statistical framework for reconstructing genomes from metagenomic data

bioRxiv

Nov 15, 2014

Dongwan Don KangZhong Wang

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Abstract

We present software that reconstructs genomes from shotgun metagenomic sequences using a reference-independent approach. This method permits the identification of OTUs in large complex communities where many species are unknown. Binning reduces the complexity of a metagenomic dataset en...read more

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Genome
Computer Software
Downstream
Analysis
Otus
Otu protein, Drosophila
Shotgun protein, Drosophila
Species
Silo (Dataset)
Microbiome
18
1
39
Paper Details
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  • A robust statistical framework for reconstructing genomes from metagenomic data

    bioRxiv

    Nov 15, 2014

    Dongwan Don KangZhong Wang

    PMID: 990011460

    DOI: 10.1101/011460

    Abstract

    We present software that reconstructs genomes from shotgun metagenomic sequences using a reference-independent approach. This method permits the identification of OTUs in large complex communities where many species are unknown. Binning reduces the complexity of a metagenomic dataset en...read more

    Mentioned in this Paper

    Genome
    Computer Software
    Downstream
    Analysis
    Otus
    18
    1
    39
    Paper Details
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