PMID: 18188422Jan 12, 2008Paper

ACUA: a software tool for automated codon usage analysis

Bioinformation
Umashankar VetrivelSudarsanam Dorairaj

Abstract

Currently available codon usage analysis tools lack intuitive graphical user interface and are limited to inbuilt calculations. ACUA (Automated Codon Usage Tool) has been developed to perform high throughput sequence analysis aiding statistical profiling of codon usage. The results of ACUA are presented in a spreadsheet with all perquisite codon usage data required for statistical analysis, displayed in a graphical interface. The package is also capable of on-click sequence retrieval from the results interface, and this feature is unique to ACUA. The package is available for non-commercial purposes and can be downloaded from: http://www.bioinsilico.com/acua.

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Citations

Aug 15, 2012·Biological Reviews of the Cambridge Philosophical Society·Susanta K Behura, David W Severson
Jul 10, 2010·Genome Génome / Conseil National De Recherches Canada·Haiying LiangJohn E Carlson
May 31, 2011·BMC Microbiology·Andrzej MazurAnna Skorupska
Jul 23, 2013·PLoS Genetics·Jorge Fernández-VázquezElena Hidalgo
Dec 4, 2012·The HUGO Journal·Umashankar VetrivelSudarsanam Dorairaj
May 16, 2014·Molecules and Cells·Hyoung Tae KimKi-Joong Kim
Feb 1, 2015·Journal of Theoretical Biology·Himanshu Bhusan SamalRajani Kanta Mahapatra
Jun 20, 2017·Journal of Biomolecular Structure & Dynamics·Anupriya Sadhasivam, Umashankar Vetrivel
Aug 24, 2019·Chemical Biology & Drug Design·Samdani Ansar, Umashankar Vetrivel
Mar 20, 2018·Evolutionary Bioinformatics Online·Sudeesh KarumathilVijaya R Dirisala
Jul 14, 2018·Genetics and Molecular Biology·Paulo Eduardo Brandão

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