Amplicon sequencing reveals the bacterial diversity in milk, dairy premises and Serra da Canastra artisanal cheeses produced by three different farms

Food Microbiology
Bruna Akie KamimuraAnderson S Sant'Ana

Abstract

In this work, the amplicon sequencing of the 16 S rRNA gene was employed to investigate the bacterial diversity in ingredients, processing environment, and ripened cheeses collected from three farms producing Serra da Canastra artisanal cheese. The data obtained indicated a remarkable variability in the bacteria consortia of the milk, whey, and environmental samples collected in farms 1, 2, and 3, despite their location in the same city. On the other hand, the starter culture and final product (ripened cheese) presented more constant and similar microbiota no matter the farm. The findings suggest that Streptococcus and Lactococcus have competitive advantages throughout Serra da Canastra cheese-making/ripening, which is crucial for their high relative abundance in the final products. An exploratory assessment based on sequencing data available in the literature showed that the Serra da Canastra cheeses sequences clustered with specific cheese varieties that are also made from raw milk but ripened for very different periods. The findings of this study highlight that despite the variability of milk and whey microbiota among the three farms, the starter culture ("pingo") has strong relevance in shaping the microbiota of the final p...Continue Reading

References

Apr 12, 2001·Journal of Applied Microbiology·S CoppolaG Moschetti
Sep 17, 2002·Biometrics·Anne Chao, John Bunge
Dec 8, 2005·Applied and Environmental Microbiology·Catherine Lozupone, Rob Knight
May 8, 2007·Journal of Bacteriology·Kelly P WilliamsAllan W Dickerman
Jun 26, 2007·Applied and Environmental Microbiology·Qiong WangJames R Cole
Aug 19, 2007·Applied Microbiology and Biotechnology·Pawinee DeetaeSandra Helinck
Feb 24, 2009·International Journal of Food Microbiology·Maria Laura GianninoMaria Feligini
Apr 14, 2009·International Journal of Food Microbiology·Sylvie LortalGiuseppe Licitra
Jun 24, 2009·International Journal of Food Microbiology·Erick CasaltaJean-Claude Ogier
Nov 17, 2009·Bioinformatics·J Gregory CaporasoRob Knight
Apr 13, 2010·Nature Methods·J Gregory CaporasoRob Knight
Aug 14, 2010·International Journal of Food Microbiology·P DolciL Cocolin
Aug 17, 2010·Bioinformatics·Robert C Edgar
Mar 25, 2011·International Journal of Food Microbiology·Mallory VacheyrouYvette Bouton
Jun 28, 2011·Bioinformatics·Robert C EdgarRob Knight
Jan 17, 2012·Applied and Environmental Microbiology·Angel AlegríaMagdalena Kowalczyk
Apr 10, 2012·International Journal of Food Microbiology·Robert DidienneMarie-Christine Montel
Sep 4, 2012·Applied and Environmental Microbiology·Danilo ErcoliniMichele Iacono
Nov 24, 2012·Molecular Ecology·C Alex Buerkle, Zachariah Gompert
Jun 12, 2013·Journal of Dairy Science·Lisa QuigleyPaul D Cotter
Jun 25, 2013·Applied and Environmental Microbiology·Nicholas A Bokulich, David A Mills
Jul 3, 2013·FEMS Microbiology Reviews·Lisa QuigleyPaul D Cotter
Mar 20, 2014·International Journal of Food Microbiology·Marie-Christine MontelFrançoise Berthier
Aug 3, 2014·Food Microbiology·Alejandro Aldrete-TapiaMontserrat Hernández-Iturriaga
Sep 23, 2014·Brazilian Journal of Microbiology : [publication of the Brazilian Society for Microbiology]·Éder GalinariCélia Lúcia de Luces Fortes Ferreira
Dec 3, 2014·International Journal of Food Microbiology·Cristina RiquelmeOldemiro A Rego
Dec 6, 2014·Food Microbiology·Oğuz AydemirLuc De Vuyst
Feb 12, 2015·FEMS Microbiology Letters·Françoise IrlingerEric Dugat-Bony
Sep 5, 2015·Food Microbiology·Daniela BassiPier Sandro Cocconcelli
Sep 6, 2015·Applied and Environmental Microbiology·Giuseppina StellatoDanilo Ercolini
Feb 3, 2016·Journal of Dairy Science·Aarón F González-CórdovaBelinda Vallejo-Cordoba
Apr 18, 2016·Journal of Dairy Science·Gregory TurbesLisbeth Meunier-Goddik
Oct 22, 2016·International Journal of Food Microbiology·Eric Dugat-BonyFrançoise Irlinger

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Citations

Jan 5, 2021·Brazilian Journal of Microbiology : [publication of the Brazilian Society for Microbiology]·Anderson Carlos CamargoLuís Augusto Nero
Nov 25, 2020·Current Opinion in Biotechnology·Andrea GalimbertiMassimo Labra
Jan 19, 2021·Critical Reviews in Food Science and Nutrition·Teresa ZottaEugenio Parente
Jan 30, 2021·Food Research International·Anderson Carlos CamargoAntônio Fernandes de Carvalho
Mar 5, 2021·Applied Microbiology and Biotechnology·Jun Haeng NamSi Hong Park

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