An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

The ISME Journal
Daniel McDonaldPhilip Hugenholtz


Reference phylogenies are crucial for providing a taxonomic framework for interpretation of marker gene and metagenomic surveys, which continue to reveal novel species at a remarkable rate. Greengenes is a dedicated full-length 16S rRNA gene database that provides users with a curated taxonomy based on de novo tree inference. We developed a 'taxonomy to tree' approach for transferring group names from an existing taxonomy to a tree topology, and used it to apply the Greengenes, National Center for Biotechnology Information (NCBI) and cyanoDB (Cyanobacteria only) taxonomies to a de novo tree comprising 408,315 sequences. We also incorporated explicit rank information provided by the NCBI taxonomy to group names (by prefixing rank designations) for better user orientation and classification consistency. The resulting merged taxonomy improved the classification of 75% of the sequences by one or more ranks relative to the original NCBI taxonomy with the most pronounced improvements occurring in under-classified environmental sequences. We also assessed candidate phyla (divisions) currently defined by NCBI and present recommendations for consolidation of 34 redundantly named groups. All intermediate results from the pipeline, which ...Continue Reading


Jan 24, 1998·Journal of Bacteriology·Philip HugenholtzNorman R Pace
Mar 15, 2001·FEMS Microbiology Ecology·K M. Kelly, A Y. Chistoserdov
Feb 27, 2004·Nucleic Acids Research·Wolfgang LudwigKarl-Heinz Schleifer
Mar 4, 2006·Science·Francesca D CiccarelliPeer Bork
May 5, 2006·Applied and Environmental Microbiology·Ruth E LeyNorman R Pace
Jul 6, 2006·Applied and Environmental Microbiology·Todd Z DeSantisGary L Andersen
Jun 26, 2007·Applied and Environmental Microbiology·Qiong WangJames R Cole
Aug 22, 2007·Genome Biology·Rob KnightGavin A Huttley
Oct 4, 2007·International Journal of Systematic and Evolutionary Microbiology·Jongsik ChunYoung-Woon Lim
Oct 19, 2007·Nature·Peter J TurnbaughJeffrey I Gordon
Sep 13, 2008·Systematic and Applied Microbiology·Jörg PepliesFrank Oliver Glöckner
Sep 27, 2008·Current Opinion in Microbiology·Susannah G Tringe, Philip Hugenholtz
Nov 14, 2008·Nucleic Acids Research·J R ColeJ M Tiedje
Jan 16, 2009·PloS One·Konstantinos MavromatisNikos C Kyrpides
Mar 25, 2009·Bioinformatics·Eric P NawrockiSean R Eddy
Oct 13, 2009·Genome Research·Jane PetersonMark Guyer
Nov 17, 2009·Bioinformatics·J Gregory CaporasoRob Knight
Dec 25, 2009·Nature·Dongying WuJonathan A Eisen
Mar 13, 2010·PloS One·Morgan N PriceAdam P Arkin
Nov 26, 2010·Nucleic Acids Research·Eric W SayersJian Ye


Oct 29, 2013·Systematic and Applied Microbiology·Wim De SmetBernard De Baets
Oct 12, 2012·The ISME Journal·Parag A VaishampayanKasthuri Venkateswaran
Dec 14, 2012·The ISME Journal·Scott Thomas BatesNoah Fierer
Jul 27, 2012·The ISME Journal·J Kirk HarrisNorman R Pace
Aug 9, 2013·The ISME Journal·Cornelia RoderChristian R Voolstra
Apr 12, 2013·The ISME Journal·Ashley ShadeNoah Fierer
Aug 27, 2013·Nature Biotechnology·Morgan G I LangilleCurtis Huttenhower
Jul 13, 2012·Briefings in Bioinformatics·Monica SantamariaGraziano Pesole
Oct 11, 2012·Bioinformatics·Nicolas ParisotEric Peyretaillade
May 7, 2013·Bioinformatics·Daniel Alonso-AlemanyGabriel Valiente
Aug 15, 2013·Human Molecular Genetics·Michael J CoxMiriam F Moffatt
Jul 19, 2013·Genome Research·Catherine A LozuponeRob Knight
May 28, 2013·Applied and Environmental Microbiology·Till BayerChristian R Voolstra
Jun 25, 2013·Applied and Environmental Microbiology·Nicholas A Bokulich, David A Mills
Jun 26, 2012·Applied and Environmental Microbiology·Vicente Gomez-AlvarezJorge W Santo Domingo
Jun 12, 2012·Applied and Environmental Microbiology·Tristrom WinsleyB C Ferrari
Jun 26, 2012·Applied and Environmental Microbiology·Myron T La DucKasthuri Venkateswaran
Sep 4, 2012·Applied and Environmental Microbiology·Danilo ErcoliniMichele Iacono
Jun 7, 2013·Journal of Clinical Microbiology·Nicholas A BokulichMark A Underwood
Jan 19, 2013·American Journal of Respiratory and Critical Care Medicine·Dana L WillnerDaniel C Chambers
Apr 26, 2013·American Journal of Respiratory and Critical Care Medicine·Yvonne J HuangRobert M Senior
May 15, 2013·BMC Bioinformatics·Arlin StoltzfusGreg Jordan
Jan 25, 2008·BMC Bioinformatics·Patrick D Schloss, J Handelsman
May 3, 2012·Algorithms for Molecular Biology : AMB·Frederick A Matsen, Aaron Gallagher
Aug 21, 2012·PLoS Biology·Dirk GeversCurtis Huttenhower
Jul 5, 2012·PloS One·Lu FanTorsten Thomas
Aug 1, 2012·PloS One·Anthony A FodorAshlee M Earl
Nov 13, 2012·PloS One·Anders LanzénTim Urich
Feb 2, 2013·PloS One·Krissi M HewittScott T Kelley
May 15, 2013·PloS One·Antonietta MelloPaola Bonfante
Jun 19, 2013·PloS One·Alexander J ProbstChristine Moissl-Eichinger
Jul 11, 2013·PloS One·Nicholas A BokulichDavid A Mills
Jul 12, 2013·PloS One·Vladimir LazarevicJacques Schrenzel
Jan 28, 2014·PloS One·Inessa Lacativa BagatiniArmando Augusto Henriques Vieira
Jan 28, 2014·PloS One·Tobin J HammerNoah Fierer
Apr 9, 2014·PloS One·Naraporn SomboonnaSissades Tongsima
May 21, 2014·PloS One·Sean M GibbonsJack A Gilbert
Aug 21, 2013·Standards in Genomic Sciences·Scott Thomas BatesJason E Stajich
Jan 10, 2014·International Journal of Molecular Sciences·Federica Del ChiericoPutignani Lorenza
Sep 10, 2013·Metagenomics·Huei-Hun Elizabeth TsengJohn Stamatoyannopoulos
Mar 15, 2013·Proceedings of the National Academy of Sciences of the United States of America·Sean M GibbonsJack A Gilbert
Jan 25, 2014·Genome Announcements·Erik R HawleyMatthias Hess
Jun 3, 2014·BMC Microbiology·Alba SantiagoChaysavanh Manichanh
May 7, 2014·Applied Microbiology and Biotechnology·Jennifer Moore-KuceraMarion Brodhagen
Jun 24, 2014·Biotechnology for Biofuels·Diego Javier JiménezJan Dirk van Elsas
Apr 29, 2014·Database : the Journal of Biological Databases and Curation·Faouzi JaziriPierre Peyret
Apr 9, 2014·Genome Biology and Evolution·Rochelle M SooPhilip Hugenholtz
Aug 29, 2013·Archaea : an International Microbiological Journal·Colby A Swanson, Marek K Sliwinski
Jan 1, 2014·Proceedings of the National Academy of Sciences of the United States of America·Klaus SchlaeppiPaul Schulze-Lefert
Apr 4, 2014·Applied Microbiology and Biotechnology·Kasthuri VenkateswaranJay Perry
Jun 27, 2014·Proceedings of the National Academy of Sciences of the United States of America·A Murat ErenJessica L Mark Welch
Aug 13, 2014·Extremophiles : Life Under Extreme Conditions·Brian P HedlundTanja Woyke
Jul 9, 2014·The Journal of Clinical Investigation·Yael HabermanLee A Denson
Jan 1, 2014·Microbiome·Falk HildebrandJeroen Raes
Dec 3, 2014·International Journal of Food Microbiology·Giuseppina StellatoDanilo Ercolini
Oct 23, 2014·PeerJ·Catherine A PfisterSean M Gibbons
Dec 10, 2014·Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences·Christina WarinnerMatthew J Collins
Oct 1, 2013·Applied and Environmental Microbiology·Maria C PortilloNoah Fierer
Jun 5, 2014·Nature·Sathish SubramanianJeffrey I Gordon
Mar 1, 2016·Frontiers in Microbiology·Jacquelynn Benjamino, Joerg Graf
Feb 2, 2016·Nature Medicine·Maria G Dominguez-BelloJose C Clemente
Feb 26, 2016·Water Research·Leo A KucekLargus T Angenent
Oct 24, 2015·Clinical Microbiology and Infection : the Official Publication of the European Society of Clinical Microbiology and Infectious Diseases·F Avilés-JiménezJ Torres
Jul 19, 2014·Cell·Julia K GoodrichRuth E Ley
Feb 13, 2016·Microbiome·Brendan J KellyRonald G Collman
Dec 15, 2015·The Science of the Total Environment·A M IbekweG B Reddy
Feb 10, 2016·Frontiers in Microbiology·Thomas C JeffriesJustin R Seymour
Jul 21, 2016·Current Opinion in Insect Science·Monica F PoelchauDeWayne Shoemaker
Feb 3, 2016·Frontiers in Veterinary Science·Anne L BallouMatthew D Koci
Oct 8, 2014·BMC Microbiology·Amber R PaulsonSteve J Perlman
Dec 17, 2014·BMC Microbiology·Juan S EscobarGloria M Agudelo
Nov 8, 2013·Nucleic Acids Research·Yemin LanGail L Rosen
Jan 29, 2016·Nature Communications·Manuel Delgado-BaquerizoBrajesh K Singh
Aug 31, 2016·Nature Microbiology·Ashfaqul AlamAndrew S Neish
Nov 26, 2015·Environmental Science & Technology·Dina M DrennanJonathan O Sharp
Dec 5, 2015·Environmental Science & Technology·Tess S WeathersJonathan O Sharp
Apr 23, 2015·Proceedings of the National Academy of Sciences of the United States of America·Albert BarberánNoah Fierer
Aug 19, 2015·Proceedings of the National Academy of Sciences of the United States of America·Jonathan W LeffNoah Fierer
Nov 9, 2015·Journal of Assisted Reproduction and Genetics·J M FranasiakR T Scott
Mar 5, 2016·Frontiers in Microbiology·Sylwia ZielińskaJoanna M Łoś
Jan 16, 2016·Frontiers in Zoology·Susanna López-LegentilPatrick M Erwin
Nov 7, 2015·Current Microbiology·Minseok Kim, James E Wells
May 31, 2015·International Journal of Legal Medicine·Sophie WeissRob Knight
Jan 9, 2016·Scientific Reports·Jinyu XuSusan E Olivo-Marston
Feb 18, 2016·Gastroenterology Research and Practice·Josué L Castro-MejíaThomas Lindebo Holm
Jan 7, 2016·Frontiers in Microbiology·Virginia H AlbarracínMaria Eugenia Farias
Dec 24, 2015·Frontiers in Microbiology·Cristina RiquelmeNaowarat Cheeptham
Sep 29, 2015·Applied Microbiology and Biotechnology·Heike SträuberSabine Kleinsteuber
Nov 29, 2015·Molecular Biology and Evolution·Yun Kit YeohPhilip Hugenholtz
Dec 18, 2014·Genome Biology·Gilberto E FloresNoah Fierer
Dec 3, 2015·Environmental Pollution·Yu-Rong LiuJi-Zheng He
Jan 15, 2015·Genome Medicine·Dan KnightsRamnik Xavier
Oct 7, 2015·Trends in Microbiology·Robert G Beiko
Sep 4, 2014·BMC Biology·Jack A GilbertRob Knight
Dec 22, 2015·Microbiological Research·Sunil BanskarYogesh S Shouche
Oct 2, 2015·The Journal of Nutritional Biochemistry·Jessie BaldwinMichael K McIntosh
Mar 4, 2015·Molecular Ecology Resources·Johan Bengtsson-PalmeRolf Henrik Nilsson
Oct 23, 2015·DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes·Lokeshwaran ManoharanDag Ahrén
Feb 24, 2015·Clinical and Experimental Immunology·Benjamin M JohnsonChenthamarakshan Vasu
Nov 19, 2014·European Journal of Immunology·Peter TougaardCamilla Hartmann Friis Hansen
Apr 3, 2014·Global Change Biology·Thomas W CrowtherMark A Bradford
Dec 21, 2014·Gut·Jonna JalankaWillem M de Vos
Jun 24, 2015·Research in Microbiology·Cyrielle GascPierre Peyret
Nov 18, 2015·FEMS Microbiology Ecology·Jenny G Webster-BrownHannah K Christenson
Nov 14, 2015·FEMS Microbiology Ecology·Ekaterina PushkarevaJosef Elster
Dec 2, 2015·Microbiome·Ashley A Ross, Josh D Neufeld
Nov 28, 2015·Scientific Reports·Laetitia G E WilkinsClaus Wedekind
Oct 23, 2015·International Journal of Food Microbiology·Eugenio ParenteAnnamaria Ricciardi
Oct 21, 2015·Frontiers in Microbiology·Ember M Morrissey, Rima B Franklin
Oct 27, 2015·Frontiers in Microbiology·Viviane CordovezJos M Raaijmakers
Sep 16, 2015·International Journal of Food Microbiology·Julia Toledo Del ÁrbolAntonio Gálvez
Sep 19, 2015·International Journal of Food Microbiology·Angela GuidoneEugenio Parente
Dec 12, 2013·Scientific Reports·Unni VikHåvard Kauserud
Oct 1, 2014·Scientific Reports·Cheong Xin ChanMark A Ragan
Oct 5, 2015·The Journal of Molecular Diagnostics : JMD·Martina I LefterovaBenjamin A Pinsky
Mar 31, 2015·Environmental Microbiology·Lauren E GilliesOlivia U Mason
Apr 8, 2015·Environmental Microbiology·Anders TorstenssonAngela Wulff
Oct 7, 2014·Cell·Henning SeedorfJeffrey I Gordon
Jul 10, 2013·Environmental Microbiology·Natalya Yutin, Michael Y Galperin
Mar 29, 2014·Molecular Nutrition & Food Research·Fabiola Gutierrez-OrozcoMark L Failla
Oct 24, 2013·Environmental Microbiology·Wei LinYongxin Pan
Apr 29, 2014·Molecular Ecology·Kerri L CoonMichael R Strand
Oct 15, 2013·Molecular Ecology·Frédéric DelsucRob Knight
Apr 15, 2015·Environmental Microbiology Reports·Sarah L DeanRobert L Sinsabaugh
Nov 1, 2013·Molecular Ecology·Jordan G KuenemanValerie McKenzie
Dec 21, 2013·Methods in Ecology and Evolution·A Murat ErenMitchell L Sogin
Jul 18, 2015·Molecular Nutrition & Food Research·Yadong ZhongFrida Fåk
Nov 5, 2015·Microbiome·Daniel McDonaldRob Knight
Apr 15, 2015·Research in Microbiology·R MändarJaak Truu
Feb 7, 2015·Clinical Microbiology and Infection : the Official Publication of the European Society of Clinical Microbiology and Infectious Diseases·A J StewardsonSATURN WP1 and WP3 Study Groups
Apr 15, 2015·Beneficial Microbes·I SmidtR Mändar
Sep 15, 2015·Nature Medicine·Efrem S LimLori R Holtz
Jul 30, 2015·The Journal of Allergy and Clinical Immunology·Yvonne J HuangHomer A Boushey
Jan 26, 2016·Journal of Applied Microbiology·Norma G Jiménez-BuenoYendi E Navarro-Noya
Jun 13, 2015·Epidemiology and Infection·E O DarengC A Adebamowo
Jul 22, 2015·Environmental Science and Pollution Research International·Cécile MilitonPatricia Bonin
Apr 25, 2015·Molecular Ecology·Joanito LibertiJacobus J Boomsma
Nov 18, 2015·Scientific Reports·Jocelyn M ChooGeraint B Rogers
May 2, 2015·The ISME Journal·Adrian-Ştefan AndreiHoria L Banciu
May 1, 2016·Annals of Epidemiology·Janneke H van de Wijgert, Vicky Jespers
Jun 19, 2013·International Journal of Systematic and Evolutionary Microbiology·Nathaniel A LoseyPaul A Lawson
Feb 8, 2014·International Journal of Systematic and Evolutionary Microbiology·Mincheol KimJongsik Chun
Oct 1, 2015·Nature Communications·Christian MunckMorten O A Sommer
Sep 28, 2015·BMC Research Notes·Se-Ran JunAndrey A Gorin
Nov 2, 2014·Applied Microbiology and Biotechnology·Chuan Yi TangMing-Li Liou
Apr 14, 2016·Environmental Science and Pollution Research International·Lingwen WangLizhong Zhu
Jul 27, 2012·BMB Reports·Nicholas A Bokulich, David A Mills
Nov 5, 2014·Environmental Microbiology·Jonathan W LeffNoah Fierer
Nov 19, 2014·Environmental Microbiology·Daniel Antony PassPeter Kille
Feb 17, 2015·Environmental Microbiology Reports·Allison M TracyC Drew Harvell
May 31, 2015·Bioelectrochemistry·Carlo SantoroAndrew J Schuler
Aug 28, 2015·Proceedings. Biological Sciences·Albert BarberánNoah Fierer
Mar 1, 2015·International Journal of Food Microbiology·Anna GreppiLuca Cocolin
Apr 11, 2014·BioMed Research International·Valeria D'ArgenioFrancesco Salvatore
May 23, 2015·Food Microbiology·Nicholas A BokulichDavid A Mills
Jul 6, 2015·Biodegradation·Olga ChusovaEmma Nehrenheim
Dec 3, 2014·Environmental Science & Technology·David T TanPaige J Novak
Jun 25, 2013·FEMS Microbiology Reviews·Ines YangSebastian Suerbaum
Jun 6, 2015·Current Microbiology·Melissa SchancheKnut Rudi
Jun 30, 2015·Database : the Journal of Biological Databases and Curation·Simon Jon McIlroyPer Halkjær Nielsen
Dec 19, 2014·Microbiome·Morgan G I LangilleRobert G Beiko
Jun 13, 2015·Hepatology International·Niels van BestSander S Rensen
Jun 5, 2015·Frontiers in Microbiology·Grace PoldKristen M DeAngelis
Jan 15, 2015·The Journal of Infectious Diseases·James M HortonMartin J Blaser
Jun 7, 2014·Beneficial Microbes·G D A HermesHauke Smidt
Apr 29, 2015·Nature Reviews. Microbiology·Eric A FranzosaCurtis Huttenhower
Aug 11, 2015·Journal of Advanced Research·Noha H YoussefMostafa S Elshahed
Apr 1, 2015·Proceedings of the National Academy of Sciences of the United States of America·Amina BouslimaniPieter C Dorrestein
Jul 25, 2014·Allergology International : Official Journal of the Japanese Society of Allergology·Tadao EnomotoJin-Zhong Xiao
Mar 12, 2015·Toxicology and Applied Pharmacology·Veronica L MasseyGavin E Arteel
Apr 24, 2015·Environmental Science and Pollution Research International·Daniel S ReadClaus Svendsen
Oct 29, 2014·The ISME Journal·Martin HartmannFranco Widmer
Nov 19, 2013·Cell Host & Microbe·Tyler C CullenderRuth E Ley
Dec 30, 2014·International Journal of Infectious Diseases : IJID : Official Publication of the International Society for Infectious Diseases·Kai-tao HuZhong-ming Zeng
Sep 17, 2013·Cell Host & Microbe·Catherine A LozuponeBrent E Palmer
Dec 4, 2012·The Journal of Allergy and Clinical Immunology·Magali Noval RivasTalal A Chatila
Mar 18, 2015·Journal of Microbiological Methods·Mapula Kgomotso Annah MaropolaMarla Trindade
Dec 3, 2014·Brain, Behavior, and Immunity·Lisa M ChristianMichael T Bailey
Nov 20, 2014·Frontiers in Microbiology·Marie L CuvelierJose V Lopez
Aug 1, 2014·Frontiers in Microbiology·Tristrom J WinsleySteven D Siciliano
Jan 23, 2015·Frontiers in Microbiology·Hayssam SoueidanMacha Nikolski
Jun 7, 2014·Frontiers in Cellular and Infection Microbiology·Vladimir LazarevicJacques Schrenzel
Sep 13, 2014·The ISME Journal·Husen ZhangXin M Luo
Dec 17, 2014·Systematic Biology·Benjamin D KaehlerGavin A Huttley
Sep 23, 2014·Digestive Diseases and Sciences·Katherine E ZychowskiTimothy D Phillips
Jul 26, 2014·The ISME Journal·Naji M BassilJonathan R Lloyd
Sep 23, 2014·The ISME Journal·Daniel S ReadRobert I Griffiths
May 29, 2013·FEMS Microbiology Ecology·Sotirios VasileiadisMarco Trevisan
May 23, 2014·FEMS Microbiology Ecology·Olesya V KolmakovaMaria Y Trusova
Nov 16, 2014·Applied and Environmental Microbiology·Sean M GibbonsScott T Kelley
Nov 12, 2014·Proceedings of the National Academy of Sciences of the United States of America·Roberta M O'ConnorDaniel L Distel
Aug 19, 2014·PloS One·Bettina Pyndt JørgensenDorte Bratbo Sørensen
May 27, 2015·PloS One·Alexander J ProbstNicholas Ashbolt
Nov 18, 2015·Journal of Crohn's & Colitis·Giuseppina LiguoriHarry Sokol
May 12, 2016·Nucleic Acids Research·Alexey M KozlovAlexandros Stamatakis
Mar 18, 2015·PloS One·Martin ZinicolaRodrigo Carvalho Bicalho
May 18, 2016·Proceedings of the National Academy of Sciences of the United States of America·Stefan O ReberChristopher A Lowry
Jun 1, 2016·Frontiers in Microbiology·J C McCannJuan J Loor
May 6, 2016·Frontiers in Microbiology·Daniel R UtterGary G Borisy
May 24, 2016·Scientific Reports·Xavier MartinezChaysavanh Manichanh
May 29, 2016·Nucleic Acids Research·James RollNeocles Leontis
Aug 11, 2015·PloS One·Laura WeldonMark Viney
Oct 5, 2016·JCI Insight·Ta-Chiang LiuNita H Salzman
Jun 6, 2016·Journal of Microbiology, Immunology, and Infection = Wei Mian Yu Gan Ran Za Zhi·Chi-Ying TsaiMing-Li Liou
Jun 9, 2016·Nature Communications·Jesse R ZaneveldRebecca Vega Thurber
Nov 12, 2014·PloS One·Andrea CampisanoIlaria Pertot
Oct 4, 2014·PloS One·Erin T BellCaroline S Mansfield
Jun 22, 2016·Nature Communications·Jérémie GautheronTom Luedde
Jul 15, 2015·PloS One·Alf SkovgaardDennis Sandris Nielsen
Nov 20, 2014·PloS One·Jeffrey D GalleyLisa M Christian
Jun 28, 2016·International Journal of Food Microbiology·Raquel LoNidhi Bansal
Feb 26, 2016·Environmental Microbiology·Sarah L O'BrienDionysios A Antonopoulos
Jun 9, 2016·Environmental Microbiology Reports·Lucas A MeirellesUlrich G Mueller
Aug 27, 2016·Nature Microbiology·Henrik M RoagerTine R Licht
Jul 2, 2016·Scientific Reports·Svetlana Ferreira LimaRodrigo Carvalho Bicalho
Jul 28, 2016·Frontiers in Microbiology·Olivia U MasonBrian J Roberts
Mar 25, 2015·PloS One·Luiz Felipe Valter de Oliveira, Rogério Margis
Jul 1, 2016·Clinical Infectious Diseases : an Official Publication of the Infectious Diseases Society of America·Rafael AraosErika M C D'Agata
Aug 4, 2016·Frontiers in Microbiology·Gonzalo Martínez-FernandezC S McSweeney
Jul 20, 2016·International Journal of Food Microbiology·Cecilia FontanaGraciela Vignolo
Jul 28, 2016·Microbial Ecology·Varsik MartirosyanYosef Steinberger
Jul 28, 2016·Chemosphere·Ciera M KinleyMonique C Haakensen
Aug 4, 2016·Veterinary Dermatology·Felipe PierezanAline Rodrigues Hoffmann
Jul 29, 2016·Journal of Crohn's & Colitis·Emily K WrightCarl D Kirkwood
Sep 1, 2016·Frontiers in Microbiology·Madhavi L KakumanuMark A Williams
Oct 27, 2016·Nature Microbiology·Alexandra E LivanosMartin J Blaser
Sep 11, 2016·International Journal of Food Microbiology·Folarin A OguntoyinboCharles M A P Franz
Apr 26, 2013·Environmental Science & Technology·Christopher N LylesJoseph M Suflita
Jul 2, 2014·Environmental Science & Technology·Eva M GilbertSusanne Lackner
Oct 9, 2014·Environmental Science & Technology·Katherine R ZodrowMenachem Elimelech
Feb 5, 2014·Environmental Science & Technology·Eva M GilbertSusanne Lackner
Oct 3, 2013·Environmental Science & Technology·Robert M BowersNoah Fierer
Sep 7, 2016·Microbial Ecology·Quinn S McFrederickUlrich G Mueller
Sep 8, 2016·Applied Microbiology and Biotechnology·Charlotte I CarlströmJohn D Coates
Sep 8, 2016·Environmental Science & Technology·Erica M HartmannJessica L Green
Sep 27, 2016·Frontiers in Microbiology·Sylwia ZielińskaJoanna M Łoś
Sep 17, 2016·Brain, Behavior, and Immunity·Jeffrey D GalleyMichael T Bailey
Sep 7, 2016·Ecotoxicology and Environmental Safety·Andrew D McQueenMonique C Haakensen
Sep 3, 2016·Molecular Ecology·Christine P ZolnikSergios-Orestis Kolokotronis
Sep 21, 2016·Scientific Reports·Rebekah C KennedyJiangang Chen
Sep 23, 2016·Proceedings. Biological Sciences·Jordan G KuenemanValerie McKenzie
Sep 27, 2016·Genome Biology·Michelle BeaumontJordana T Bell
Sep 23, 2016·Microbial Ecology·Kevin Panke-BuisseJenny Kao-Kniffin
Oct 12, 2016·Frontiers in Microbiology·Kevin C LeeStephen B Pointing
Oct 13, 2016·Frontiers in Microbiology·Sachia J TravingLasse Riemann
Aug 11, 2016·Molecular Ecology·Laetitia G E WilkinsClaus Wedekind
Jul 8, 2016·Microbes and Environments·Satoshi HiraokaWataru Iwasaki
Oct 1, 2016·Virulence·Laura TiptonAlison Morris
Oct 4, 2016·Nature Microbiology·Inka VanwonterghemGene W Tyson
Oct 4, 2016·Nature Microbiology·Yoshiki Vázquez-BaezaRob Knight
Oct 16, 2016·Marine Environmental Research·Sukriye Celikkol-AydinIwona B Beech
Oct 30, 2016·Frontiers in Microbiology·Mathilde JeanbilleJean-Christophe Auguet
Oct 25, 2016·Applied Microbiology and Biotechnology·Chang-Hua ChenMing-Li Liou
May 25, 2015·International Journal of Food Microbiology·Annalisa RebecchiEdoardo Puglisi
Oct 16, 2016·FEMS Microbiology Letters·Kjartan ØstbyeKnut Rudi
Oct 31, 2016·Nucleic Acids Research·The RNAcentral Consortium
Nov 2, 2016·The ISME Journal·Hans C BernsteinJames J Moran
Oct 6, 2016·FEMS Microbiology Ecology·Danilo Tosta SouzaItamar Soares Melo
Nov 27, 2015·Indoor Air·A HoisingtonJeffrey Siegel
Sep 28, 2016·The Journal of Allergy and Clinical Immunology·Inge KepertSusanne Krauss-Etschmann
Dec 16, 2016·Environmental Science & Technology·Hang-Wei HuJi-Zheng He
Dec 17, 2016·The ISME Journal·Lindsay K NewboldChristopher J van der Gast
Dec 20, 2016·Nature Microbiology·Paul CariniNoah Fierer
Oct 25, 2016·Microbes and Environments·Camilla KristoffersenKnut Rudi
Jan 16, 2016·PLoS Neglected Tropical Diseases·Kia Hee Schultz KristensenDennis Sandris Nielsen
Oct 16, 2016·PloS One·Jianguo LiXuemei Qin
Dec 8, 2016·International Journal of Obesity : Journal of the International Association for the Study of Obesity·T KimK M Habegger
Dec 5, 2016·FEMS Microbiology Ecology·Brent J SeuradgeJosh D Neufeld
Dec 13, 2016·Environmental Microbiology·Sara CoyotziJosh D Neufeld
Jan 10, 2017·Environmental Pollution·Tina B BechCarsten S Jacobsen
Feb 9, 2017·Journal of Periodontal Research·J LongX O Shu
Feb 10, 2017·Proceedings of the National Academy of Sciences of the United States of America·Shirley L ZhangAmita Sehgal
Feb 14, 2017·Nature Microbiology·Jonas HalfvarsonJanet K Jansson
Feb 15, 2017·Movement Disorders : Official Journal of the Movement Disorder Society·Erin M Hill-BurnsHaydeh Payami
Feb 22, 2017·PLoS Computational Biology·Sean M GibbonsEric J Alm
Feb 16, 2017·ELife·Justin D SilvermanLawrence A David
Mar 7, 2017·Scientific Reports·Kenneth ShatzkesDaniel E Kadouri
May 27, 2016·PloS One·Carmen HaroAntonio Camargo
Feb 22, 2017·Annals of Neurology·Helen TremlettEmmanuelle Waubant