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An integrated pipeline for de novo assembly of microbial genomes

PloS One

Oct 3, 2012

Andrew TrittAaron E Darling

Abstract

Remarkable advances in DNA sequencing technology have created a need for de novo genome assembly methods tailored to work with the new sequencing data types. Many such methods have been published in recent years, but assembling raw sequence data to obtain a draft genome has remained a c...read more

Mentioned in this Paper

Metabolic Process, Cellular
Repetitive Region
Genome
Workflow
Metagenome
Ncbi Taxonomy
Genome Assembly Sequence
Archaea
Halophiles, Extreme
Etiology
30
1
418
Paper Details
References
  • References27
  • Citations196
123
  • References27
  • Citations196
12345...

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An integrated pipeline for de novo assembly of microbial genomes

PloS One

Oct 3, 2012

Andrew TrittAaron E Darling

PMID: 23028432

DOI: 10.1371/journal.pone.0042304

Abstract

Remarkable advances in DNA sequencing technology have created a need for de novo genome assembly methods tailored to work with the new sequencing data types. Many such methods have been published in recent years, but assembling raw sequence data to obtain a draft genome has remained a c...read more

Mentioned in this Paper

Metabolic Process, Cellular
Repetitive Region
Genome
Workflow
Metagenome
Ncbi Taxonomy
Genome Assembly Sequence
Archaea
Halophiles, Extreme
Etiology
30
1
418

Similar Papers Found In These Feeds

Archaeogenetics

Recent advances in genomic sequencing has led to the discovery of new strains of Archaea and shed light on their evolutionary history. Discover the latest research on Archaeogenetics here.

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Improved gap size estimation for scaffolding algorithms

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Kristoffer SahlinLars Arvestad
Paper Details
References
  • References27
  • Citations196
123
  • References27
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12345...
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