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Analysis options for high-throughput sequencing in miRNA expression profiling

BMC Research Notes

Mar 15, 2014

Tomasz StokowyKnut Krohn

Abstract

Recently high-throughput sequencing (HTS) using next generation sequencing techniques became useful in digital gene expression profiling.Our study introduces analysis options for HTS data based on mapping to miRBase or counting and grouping of identical sequence reads. Those approaches ...read more

Mentioned in this Paper

MIR181A2 gene
Real-Time Polymerase Chain Reaction
MIR146B wt Allele
Microarray Analysis
MIR30A gene
Gene Expression Regulation, Neoplastic
MIR181A2 wt Allele
Genome
MIR30D gene
Nucleic Acid Hybridization Procedure
3
81
Paper Details
References
  • References43
  • Citations16
12345
  • References43
  • Citations16
12

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Analysis options for high-throughput sequencing in miRNA expression profiling

BMC Research Notes

Mar 15, 2014

Tomasz StokowyKnut Krohn

PMID: 24625073

DOI: 10.1186/1756-0500-7-144

Abstract

Recently high-throughput sequencing (HTS) using next generation sequencing techniques became useful in digital gene expression profiling.Our study introduces analysis options for HTS data based on mapping to miRBase or counting and grouping of identical sequence reads. Those approaches ...read more

Mentioned in this Paper

MIR181A2 gene
Real-Time Polymerase Chain Reaction
MIR146B wt Allele
Microarray Analysis
MIR30A gene
Gene Expression Regulation, Neoplastic
MIR181A2 wt Allele
Genome
MIR30D gene
Nucleic Acid Hybridization Procedure
3
81

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Deep Homology

Deep homology investigates the genetic mechanisms that are homologous and deeply conserved across a wide range of species in evolutionary developmental biology. Discover the latest research on deep homology here.

Cancer Genomics (Keystone)

Cancer genomics approaches employ high-throughput technologies to identify the complete catalog of somatic alterations that characterize the genome, transcriptome and epigenome of cohorts of tumor samples. Discover the latest research using such technologies in this feed.

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References
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