Auxin Response Factors (ARFs) are potential mediators of auxin action in tomato response to biotic and abiotic stress (Solanum lycopersicum)

PloS One
Sarah BouzroudMohamed Zouine

Abstract

Survival biomass production and crop yield are heavily constrained by a wide range of environmental stresses. Several phytohormones among which abscisic acid (ABA), ethylene and salicylic acid (SA) are known to mediate plant responses to these stresses. By contrast, the role of the plant hormone auxin in stress responses remains so far poorly studied. Auxin controls many aspects of plant growth and development, and Auxin Response Factors play a key role in the transcriptional activation or repression of auxin-responsive genes through direct binding to their promoters. As a mean to gain more insight on auxin involvement in a set of biotic and abiotic stress responses in tomato, the present study uncovers the expression pattern of SlARF genes in tomato plants subjected to biotic and abiotic stresses. In silico mining of the RNAseq data available through the public TomExpress web platform, identified several SlARFs as responsive to various pathogen infections induced by bacteria and viruses. Accordingly, sequence analysis revealed that 5' regulatory regions of these SlARFs are enriched in biotic and abiotic stress-responsive cis-elements. Moreover, quantitative qPCR expression analysis revealed that many SlARFs were differentially...Continue Reading

References

Dec 1, 1971·The Biochemical Journal·W J Broughton, M J Dilworth
May 13, 1999·Proceedings of the National Academy of Sciences of the United States of America·T UlmasovT J Guilfoyle
Sep 4, 1999·The Plant Journal : for Cell and Molecular Biology·T UlmasovT J Guilfoyle
Feb 15, 2002·The Plant Journal : for Cell and Molecular Biology·Rishikesh P BhaleraoGöran Sandberg
Mar 20, 2003·Plant Physiology·Jim MattssonThomas Berleth
Nov 25, 2003·Nature·Didier ReinhardtCris Kuhlemeier
Jul 20, 2004·The Plant Cell·Ramanjulu Sunkar, Jian-Kang Zhu
Aug 19, 2004·The Plant Journal : for Cell and Molecular Biology·Eric A SchmelzHans T Alborn
Jun 18, 2005·The Plant Journal : for Cell and Molecular Biology·Yoko OkushimaAthanasios Theologis
Jun 18, 2005·The Plant Journal : for Cell and Molecular Biology·Jill C WilmothJason W Reed
Aug 27, 2005·PLoS Genetics·Matthew A HannahDirk K Hincha
Dec 24, 2005·Proceedings of the National Academy of Sciences of the United States of America·C Alex EsmonEmmanuel Liscum
Feb 28, 2007·Plant, Cell & Environment·Imene GharbiRenaud Brouquisse
Mar 14, 2007·Trends in Biochemical Sciences·Yong Zhao, Deepak Srivastava
Sep 29, 2007·Current Opinion in Plant Biology·Tom J Guilfoyle, Gretchen Hagen
Nov 8, 2007·BMC Plant Biology·Udaya C KalluriGerald A Tuskan
Feb 14, 2009·Journal of Experimental Botany·Salma ChaabouniMondher Bouzayen
Jun 11, 2009·Plant Signaling & Behavior·Yang-Rong CaoJin-Song Zhang
May 1, 2007·Plant Signaling & Behavior·Narendra Tuteja
Sep 29, 2009·Journal of Experimental Botany·Gaston ZollaSimon Barak
Oct 23, 2009·Plant Signaling & Behavior·Challa Ghanashyam, Mukesh Jain
Feb 19, 2010·Journal of Experimental Botany·Pyung Ok LimHong Gil Nam

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Citations

Mar 12, 2020·International Journal of Molecular Sciences·Deok Hyun SeoGeupil Jang
Aug 4, 2019·International Journal of Molecular Sciences·Kalaivani Nadarajah, Ilakiya Sharanee Kumar
Jul 1, 2020·BMC Plant Biology·Bhavika TiwariWolfgang Frank
May 21, 2020·Journal of Experimental Botany·Tomas RibbaJosé Antonio O'Brien
Mar 4, 2021·International Journal of Molecular Sciences·Evangelia StavridouIrini Nianiou-Obeidat
Feb 9, 2021·The New Phytologist·Li-Long PanShu-Sheng Liu
Apr 4, 2021·International Journal of Molecular Sciences·Mengyi ChenYanwei Hao
May 12, 2021·Physiologia Plantarum·Gabriella FrosiMauro Guida Santos
Jun 25, 2021·Frontiers in Plant Science·Chunoti ChangwalAjay Arora
Jun 29, 2021·Physiology and Molecular Biology of Plants : an International Journal of Functional Plant Biology·Liyan SuQiang Li
Aug 8, 2021·International Journal of Molecular Sciences·Kinga KęskaMałgorzata Czernicka
Aug 6, 2021·Plant Cell Reports·Smita Chaudhry, Gagan Preet Singh Sidhu

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Datasets Mentioned

BETA
DC3000

Methods Mentioned

BETA
environmental stresses
PLACE
transgenic
PCR
salt stress
RNAseq
RNA-Seq
salt treatment

Software Mentioned

ContigExpress
Statistica soflware
TOMEXPRESS
PLACE

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