Bacteroides caecicola sp. nov. and Bacteroides gallinaceum sp. nov., isolated from caecum of an Indonesian chicken

International Journal of Systematic and Evolutionary Microbiology
Tomohiro IrisawaMoriya Ohkuma

Abstract

Six strains of anaerobic bacteria, C13EG70T, C13EG118, C13EG186 T, C13GAMG5, C13GAMG28 and C13GAMG40, were isolated from a caecum of healthy chicken bleeding in Bogor, Indonesia. Phylogenetic analysis showed the isolates were separated into two groups. Group I (C13EG70T and C13EG118) showed nearly identical 16S rRNA gene sequences (99.9% sequence similarity). Group II (C13EG186T, C13GAMG5, C13GAMG28 and C13GAMG40) showed nearly identical 16S rRNA gene sequences (> 99.4 % sequence similarity). The isolates showed low 16S rRNA gene sequence similarities to recognized species of the genus Bacteroides. High gene sequence similarities were found between type strains (C13EG70T and C13EG186T) and Bacteroides salanitronis JCM 13657T (87.9, 91.5 %, respectively). Physiological, biochemical and genotypic characteristics demonstrated to separate from the type strain of B. salanitronis. It is concluded that Group I and Group II represent novel species. Two novel Bacteroides species are proposed Bacteroides caecicola sp. nov. (type strain; C13EG70T =LIPI12-4-Ck732T =JSAT12-4-Ck732T =InaCC B449T =NBRC 110958T) and Bacteroides gallinaceum sp. nov. (type strain; C13EG186T =LIPI12-4-Ck844T =JSAT12-4-Ck884T =InaCC B451T =NBRC 110963T).

References

Jan 1, 1988·Comparative Biochemistry and Physiology. A, Comparative Physiology·D H Thomas, E Skadhauge
Dec 1, 1983·The Journal of Applied Bacteriology·H N Shah, M D Collins
Feb 24, 2001·International Journal of Systematic and Evolutionary Microbiology·M KitaharaY Benno
Jan 5, 2002·Applied and Environmental Microbiology·Xiang Y ZhuRolf D Joerger
Jun 11, 2002·International Journal of Systematic and Evolutionary Microbiology·Mitsuo SakamotoYoshimi Benno
Aug 3, 2002·Microbiology and Immunology·Pham Thi Ngoc LanYoshimi Benno
Oct 8, 2003·Systematic Biology·Stéphane Guindon, Olivier Gascuel
Nov 7, 2003·Applied and Environmental Microbiology·Jiangrang LuMargie D Lee
May 15, 2004·International Journal of Systematic and Evolutionary Microbiology·Mitsuo SakamotoYoshimi Benno
Mar 19, 2005·International Journal of Systematic and Evolutionary Microbiology·Mitsuo SakamotoYoshimi Benno
Dec 13, 2006·International Journal of Systematic and Evolutionary Microbiology·Pham Thi Ngoc LanYoshimi Benno
Sep 12, 2007·Bioinformatics·M A LarkinD G Higgins
Aug 4, 2009·International Journal of Systematic and Evolutionary Microbiology·Maki KitaharaYoshimi Benno
Apr 2, 2010·Osteoporosis International : a Journal Established As Result of Cooperation Between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA·E S SirisS L Greenspan
Jul 31, 2010·Journal of Medical Microbiology·Mitsuo Sakamoto, Moriya Ohkuma
May 1, 2012·International Journal of Systematic and Evolutionary Microbiology·Mitsuo Sakamoto, Moriya Ohkuma
Aug 1, 2012·Nature Methods·Diego DarribaDavid Posada
Jun 7, 2014·International Journal of Systematic and Evolutionary Microbiology·Mitsuo SakamotoMoriya Ohkuma

❮ Previous
Next ❯

Citations

Oct 15, 2019·Frontiers in Microbiology·Marina García-LópezMarkus Göker
Aug 8, 2020·Critical Reviews in Food Science and Nutrition·Chen WangWei Chen
Apr 22, 2021·International Journal of Systematic and Evolutionary Microbiology·Yajun GeJianguo Xu

❮ Previous
Next ❯

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.

Related Papers

International Journal of Systematic and Evolutionary Microbiology
Sugiyono SaputraAchmad Dinoto
International Journal of Systematic and Evolutionary Microbiology
Hidenori HayashiYoshimi Benno
International Journal of Systematic and Evolutionary Microbiology
Soji IidaYuzuru Mikami
International Journal of Systematic and Evolutionary Microbiology
Tomohiro Irisawa, Sanae Okada
International Journal of Systematic and Evolutionary Microbiology
Renaud MaillardMuriel Vayssier-Taussat
© 2022 Meta ULC. All rights reserved