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Bayesian inference of infectious disease transmission from whole genome sequence data

bioRxiv

Dec 16, 2013

Xavier DidelotCaroline Colijn

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Abstract

Genomics is increasingly being used to investigate disease outbreaks, but an important question remains unanswered -- how well do genomic data capture known transmission events, particularly for pathogens with long carriage periods or large within-host population sizes? Here we present ...read more

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  • Bayesian inference of infectious disease transmission from whole genome sequence data

    bioRxiv

    Dec 16, 2013

    Xavier DidelotCaroline Colijn

    PMID: 990001388

    DOI: 10.1101/001388

    Abstract

    Genomics is increasingly being used to investigate disease outbreaks, but an important question remains unanswered -- how well do genomic data capture known transmission events, particularly for pathogens with long carriage periods or large within-host population sizes? Here we present ...read more

    30
    4

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