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Benchmarking of de novo assembly algorithms for Nanopore data reveals optimal performance of OLC approaches

BMC Genomics

Aug 25, 2016

Yesesri Cherukuri, Sarath Chandra Janga

Abstract

Improved DNA sequencing methods have transformed the field of genomics over the last decade. This has become possible due to the development of inexpensive short read sequencing technologies which have now resulted in three generations of sequencing platforms. More recently, a new fourt...read more

Mentioned in this Paper

Study
Alkalescens-Dispar Group
Genome
Yeasts
Nucleic Acid Sequencing
Human DNA Sequencing
Generalized Illness
Computer Programs and Programming
Benchmarking, Health Care
Genomics
11
120
Paper Details
References
  • References26
  • Citations2
123
  • References26
  • Citations2
1

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Benchmarking of de novo assembly algorithms for Nanopore data reveals optimal performance of OLC approaches

BMC Genomics

Aug 25, 2016

Yesesri Cherukuri, Sarath Chandra Janga

PMID: 27556636

DOI: 10.1186/s12864-016-2895-8

Abstract

Improved DNA sequencing methods have transformed the field of genomics over the last decade. This has become possible due to the development of inexpensive short read sequencing technologies which have now resulted in three generations of sequencing platforms. More recently, a new fourt...read more

Mentioned in this Paper

Study
Alkalescens-Dispar Group
Genome
Yeasts
Nucleic Acid Sequencing
Human DNA Sequencing
Generalized Illness
Computer Programs and Programming
Benchmarking, Health Care
Genomics
11
120

Similar Papers Found In These Feeds

CREs: Gene & Cell Therapy

Gene and cell therapy advances have shown promising outcomes for several diseases. The role of cis-regulatory elements (CREs) is crucial in the design of gene therapy vectors. Here is the latest research on CREs in gene and cell therapy.

Nanopore Sequencing

Nanopore sequencing is a third generation pproach used in the sequencing of biopolymers- specifically, polynucleotides in the form of DNA or RNA. Discover the latest research on nanopore sequencing.

Related Papers

Science China. Life Sciences

Comparative analysis of de novo transcriptome assembly

Science China. Life SciencesFebruary 9, 2013
Kaitlin ClarkeKe K Zhang
Paper Details
References
  • References26
  • Citations2
123
  • References26
  • Citations2
1
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