Abstract
A novel Alteromonas phage JH01, with the host strain identified to be Alteromonas marina SW-47(T), was isolated from the Qingdao coast during the summer of 2017. Transmission electron microscopy analysis showed that phage JH01 can be categorized into the Siphoviridae family, with an icosahedral head of 62 ± 5 nm and a long contractile tail of 254 ± 10 nm. The bioinformatic analysis shows that this phage consists of a linear, double-stranded 46,500 bp DNA molecule with a GC content of 44.39%, and 58 ORFs with no tRNA genes. The ORFs are classified into four groups, including phage packaging, phage structure, DNA replication and regulation, and hypothetical protein. The phylogenetic tree, constructed using neighbor-joining analysis, shows that phage JH01 has altitudinal homology with some Vibrio and Pseudoalteromonas phage B8b. Comparative analysis reveals the high similarity between phage JH01 and phage B8b. Additionally, our study of phage JH01 provides useful information for further research on the interaction between Alteromonas phages and their hosts.
References
Jul 1, 1987·Molecular Biology and Evolution·N Saitou, M Nei
Oct 1, 1995·International Journal of Systematic Bacteriology·G GauthierR Christen
Jan 28, 1994·Gene·K KusanoI Kobayashi
Jun 22, 1999·Nature·J A Fuhrman
Jan 11, 2005·Applied and Environmental Microbiology·Cindy M Short, Curtis A Suttle
Nov 6, 2008·International Journal of Systematic and Evolutionary Microbiology·Ilse VandecandelaerePeter Vandamme
Apr 3, 2010·Advances in Applied Microbiology·Paul Hyman, Stephen T Abedon
Jun 10, 2010·The Journal of Biological Chemistry·Liang-dong LuGuo-Ping Zhao
Jul 9, 2010·The ISME Journal·Melissa Beth DuhaimeFrank Oliver Glöckner
Sep 29, 2011·Microbial Ecology·Irshad Ul HaqIshtiaq Qadri
Jun 27, 2012·Genome Biology·Marten Boetzer, Walter Pirovano
Sep 20, 2012·F1000 Biology Reports·Joshua S Weitz, Steven W Wilhelm
Jun 27, 2013·Proceedings of the National Academy of Sciences of the United States of America·Ilnam KangJang-Cheon Cho
Nov 15, 2013·Bacteriophage·Inmaculada Garcia-HerediaAna-Belen Martin-Cuadrado
Jun 20, 2014·BMC Genomics·Mario López-PérezFrancisco Rodriguez-Valera
Jan 15, 2015·PloS One·Elena LaraSilvia G Acinas
Feb 24, 2015·International Journal of Systematic and Evolutionary Microbiology·Hidetoshi MatsuyamaIsao Yumoto
Dec 13, 2016·Current Microbiology·Zhaoyang LiuYaoyuan Zhang
Apr 21, 2017·Current Microbiology·Yu GaoHongbing Shao
Apr 21, 2017·Current Microbiology·Xue MengHongbing Shao
Apr 21, 2017·Current Microbiology·Zheng GongDuobing Wang
Jan 20, 2018·Antonie van Leeuwenhoek·Maria S NóbregaFabiano L Thompson
Sep 16, 2018·Current Microbiology·Min ZhuHongbing Shao
Citations
Jun 11, 2020·MSystems·Rafael Gonzalez-SerranoFrancisco Rodriguez-Valera
Jun 27, 2020·Current Microbiology·Xinran ZhangAndrew McMinn
Dec 8, 2020·Frontiers in Microbiology·Marike PalmerDavid A Mead
Nov 6, 2020·Current Microbiology·Zihong CuiXiuling Ji
Feb 8, 2021·Virus Research·Xinran ZhangAndrew McMinn
Feb 28, 2021·Current Microbiology·Yuzuki ShimamoriHiroki Ando
Jun 3, 2021·Viruses·Xuejin FengRui Zhang
Jun 10, 2021·MSphere·Ruijie MaRui Zhang
Oct 14, 2021·Microbiology Spectrum·Ziyue WangMin Wang