Characterization of the phylogenetic diversity of five novel species belonging to the genus Bifidobacterium: Bifidobacterium castoris sp. nov., Bifidobacterium callimiconis sp. nov., Bifidobacterium goeldii sp. nov., Bifidobacterium samirii sp. nov. and Bifidobacterium dolichotidis sp. nov

International Journal of Systematic and Evolutionary Microbiology
Sabrina DurantiMarco Ventura

Abstract

Five Bifidobacterium strains, i.e. 2020BT, 2028BT, 2033BT, 2034BT and 2036BT, were isolated from European beaver (Castor fiber), Goeldi's marmoset (Callimicogoeldii), black-capped squirrel monkey (Saimiriboliviensissubsp. peruviensis) and Patagonian mara (Dolichotispatagonum). All of these isolates were shown to be Gram-positive, facultative anaerobic, d-fructose 6-phosphate phosphoketolase-positive, non-motile and non-sporulating. Phylogenetic analyses based on 16S rRNA gene sequences, multilocus sequences (including hsp60, rpoB, dnaJ, dnaG and clpC genes) and the core genome revealed that bifidobacterial strains 2020BT, 2028BT, 2033BT, 2034BT and 2036BT exhibit close phylogenetic relatedness to Bifidobacterium biavatii DSM 23969T, Bifidobacterium bifidum LMG 11041T, Bifidobacterium choerinum LMG 10510T, Bifidobacterium gallicum LMG 11596T, Bifidobacterium imperatoris LMG 30297T, Bifidobacterium italicum LMG 30187T and Bifidobacterium vansinderenii LMG 30126T, respectively. Further genotyping based on the genome sequence of the isolated strains combined with phenotypic analyses, clearly show that these strains are distinct from each of the type strains of the so far recognized Bifidobacterium species. Thus, Bifidobacterium cas...Continue Reading

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Citations

Jun 7, 2019·Environmental Microbiology·Sabrina DurantiMarco Ventura
Jun 10, 2020·Environmental Microbiology·Gabriele Andrea LugliMarco Ventura
Aug 18, 2020·International Journal of Systematic and Evolutionary Microbiology·Vera Neuzil-BunesovaJiri Killer
Aug 26, 2020·Scientific Reports·Sabrina DurantiFrancesca Turroni
Oct 22, 2019·Frontiers in Immunology·Giulia AlessandriMarco Ventura
Dec 31, 2020·Microorganisms·Sabrina DurantiFrancesca Turroni
Oct 15, 2020·International Journal of Systematic and Evolutionary Microbiology·Monica ModestoPaola Mattarelli
May 1, 2021·Genes·Maria SattiMasanori Arita
May 12, 2021·Environmental Microbiology·Gabriele Andrea LugliMarco Ventura

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