PMID: 9440930Jan 1, 1997Paper

Combinatorial approaches to gene recognition

Computers & Chemistry
M A RoytbergM S Gelfand

Abstract

Recognition of genes via exon assembly approaches leads naturally to the use of dynamic programming. We consider the general graph-theoretical formulation of the exon assembly problem and analyze in detail some specific variants: multicriterial optimization in the case of non-linear gene-scoring functions; context-dependent schemes for scoring exons and related procedures for exon filtering; and highly specific recognition of arbitrary gene segments, oligonucleotide probes and polymerase chain reaction (PCR) primers.

References

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Citations

Jun 27, 2006·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Carmel KentMichal Ziv-Ukelson
Oct 5, 2002·Nucleic Acids Research·Catherine MathéPierre Rouzé
Jan 28, 2015·Proceedings of the National Academy of Sciences of the United States of America·Jesper L BoldsenSvenja Weise

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