Comparative Transcriptome Analysis of Waterlogging-Sensitive and Waterlogging-Tolerant Chrysanthemum morifolium Cultivars under Waterlogging Stress and Reoxygenation Conditions

International Journal of Molecular Sciences
Nan ZhaoFadi Chen

Abstract

Waterlogging stress is among the most severe abiotic stressors in the breeding and the production of Chrysanthemum morifolium. However, the mechanism underlying the response to waterlogging and post-waterlogging reoxygenation in C. morifolium remains unknown. In this study, we compared the differences between the transcriptomes of two chrysanthemum cultivars, i.e., the waterlogging-tolerant cultivar "Nannongxuefeng" and the waterlogging-sensitive cultivar "Qinglu", by performing RNA-seq to elucidate the possible mechanism of waterlogging and reoxygenation in C. morifolium. "Nannongxuefeng" had a higher ethylene production under the waterlogging and reoxygenation conditions. Furthermore, the expression of transcription factors and genes that are involved in the hormone response, N-end rule pathway and ROS signaling significantly differed between the two cultivars. "Nannongxuefeng" and "Qinglu" significantly differed in their response to waterlogging and reoxygenation, providing a deeper understanding of the mechanism underlying the response to waterlogging and guidance for the breeding of C. morifolium.

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Citations

Oct 6, 2018·Plant Signaling & Behavior·Kazi Khayrul Bashar
Aug 23, 2020·Plants·Sjon HartmanLaurentius A C J Voesenek
Nov 16, 2021·Frontiers in Plant Science·Xicheng WangWeimin Wu

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Datasets Mentioned

BETA
KF305681

Methods Mentioned

BETA
RNA-seq
PCR

Software Mentioned

BLAST
SPSS
Trinity
PossionDis
BLAST2GO
Primer

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