DOI: 10.1101/494393Dec 13, 2018Paper

Comparison of subtyping approaches and the underlying drivers of microbial signatures for chronic rhinosinusitis

BioRxiv : the Preprint Server for Biology
Kristi BiswasRichard G Douglas

Abstract

Chronic rhinosinusitis (CRS) is a heterogeneous condition characterised by persistent sinus inflammation and microbial dysbiosis. This study aimed to identify clinically relevant sub-groups of CRS patients based on distinct microbial signatures, with a comparison to the commonly used phenotypic subgrouping approach. The underlying drivers of these distinct microbial clusters were also investigated, together with associations with epithelial barrier integrity. Sinus biopsies were collected from CRS patients (n=23), and disease controls (n=8). Expression of 42 tight junction genes was evaluated using quantitative PCR, together with microbiota analysis and immunohistochemistry for measuring mucosal integrity and inflammation. CRS patients clustered into two distinct microbial sub-groups using probabilistic modelling Dirichlet (DC) multinomial mixtures. DC1 exhibited significantly reduced bacterial diversity, increased dispersion, and was dominated by Pseudomonas, Haemophilus, and Achromobacter. DC2 had significantly elevated B-cells, incidence of nasal polyps, and higher numbers of Anaerococcus, Megasphaera, Prevotella, Atopobium, and Propionibacterium. In addition, each DC exhibited distinct tight junction gene and protein expres...Continue Reading

Related Concepts

Achromobacter
B-Lymphocytes
Biological Markers
Cystic Fibrosis
Hemophilus
Immunohistochemistry
Inflammation
Polymerase Chain Reaction
Polyps
Propionibacterium

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