Complete genome of biodegradable plastics-decomposing Roseateles depolymerans KCTC 42856(T) (=61A(T))

Journal of Biotechnology
Sang-Heon LeeKyung Mo Kim

Abstract

Roseateles depolymerans is a Gram-negative, rod-shaped, flagellated, obligately aerobic, photosynthetic bacterium that was isolated from the Hanamuro River, Ibaraki Prefecture, Japan. Here, we report the complete genome of R. depolymerans KCTC 42856(T) (=61A(T)=DSM 11813(T)=CCUG 48747(T)=NCIMB 13588(T)), which consists of 5,681,722bp (G+C content of 66.57%) with a single chromosome, 4,773 protein-coding genes, 57 tRNAs and 4 rRNA operons. Several genes related to degradation of aliphatic and aromatic polymers were detected in the genome that help explain how the strain mediates decomposition of biodegradable plastics into fragments which are then assimilated and subsequently metabolized by microbial cells.

References

Nov 4, 2004·Progress in Lipid Research·Casimir C AkohJei-Fu Shaw
Oct 30, 2009·International Journal of Molecular Sciences·Yutaka TokiwaSeiichi Aiba
Mar 10, 2010·BMC Bioinformatics·Doug HyattLoren J Hauser
May 7, 2013·Nature Methods·Chen-Shan ChinJonas Korlach
Feb 14, 2014·Applied Microbiology and Biotechnology·Aamer Ali ShahToshiaki Nakajima-Kambe
Sep 29, 2015·Marine Genomics·Sang-Heon LeeKyung Mo Kim

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