Complete genome sequence of Ornithobacterium rhinotracheale strain ORT-UMN 88

Standards in Genomic Sciences
Emilie S ZehrKaren B Register

Abstract

Ornithobacterium rhinotracheale strain ORT-UMN 88 is a Gram-negative, pleomorphic, rod-shaped bacterium and an etiologic agent of pneumonia and airsacculitis in poultry. It is a member of the family Flavobacteriaceae of the phylum Bacteroidetes. O. rhinotracheale strain ORT-UMN 88 was isolated from the pneumonic lung of a turkey in 1995. It was the isolate first used to experimentally reproduce disease in turkeys and has since been the focus of investigations characterizing potential virulence factors of the bacterium. The genome of O. rhinotracheale strain ORT-UMN 88 consists of a circular chromosome of 2,397,867 bp with a total of 2300 protein-coding genes, nine RNA genes, and one noncoding RNA gene. A companion paper in this issue of SIGS reports the non-contiguous finished genome sequence of an additional strain of O. rhinotracheale, isolated in 2006.

References

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Citations

Apr 5, 2020·Applied and Environmental Microbiology·Emily A SmithTimothy J Johnson
Jan 1, 2014·Standards in Genomic Sciences·Emilie S ZehrKaren B Register
Jan 1, 2014·Standards in Genomic Sciences·Emilie S ZehrKaren B Register
Jan 2, 2020·Veterinary Sciences·Eunice Ventura BarbosaHelena Carla Castro

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Datasets Mentioned

BETA
CP006828

Methods Mentioned

BETA
Assay
PCR
ICE

Software Mentioned

CLUSTALW
DB
MEGA
SignalP
SEQuel

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