Complete Genome Sequences of Human Astrovirus Prototype Strains (Types 1 to 8)

Microbiology Resource Announcements
Christina J CastroJan Vinjé

Abstract

We report the complete genome sequences of the eight human astrovirus Oxford prototype strains. These sequences share 94.9% to 99.9% nucleotide identity with open reading frame 2 (ORF2) genes of astrovirus genomes previously deposited in GenBank and include the first complete genome of human astrovirus type 7.

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Citations

Jul 20, 2020·Current Opinion in Virology·Carlos Sandoval-Jaime

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Datasets Mentioned

BETA
L23513
L13745
AF141381
AY720891
JQ403108
HM237363
AF260508
Y08632
MK059949
MK059956

Methods Mentioned

BETA
genotyping
electron microscopy

Software Mentioned

Geneious
Dedup
Cutadapt
Bowtie 2
. py
SPAdes

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