Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice.

Plant & Cell Physiology
Ko HiranoMakoto Matsuoka

Abstract

To investigate the involvement of phytohormones during rice microspore/pollen (MS/POL) development, endogenous levels of IAA, gibberellins (GAs), cytokinins (CKs) and abscisic acid (ABA) in the mature anther were analyzed. We also analyzed the global expression profiles of genes related to seven phytohormones, namely auxin, GAs, CKs, brassinosteroids, ethylene, ABA and jasmonic acids, in MS/POL and tapetum (TAP) using a 44K microarray combined with a laser microdissection technique (LM-array analysis). IAA and GA(4) accumulated in a much higher amount in the mature anther compared with the other tissues, while CKs and ABA did not. LM-array analysis revealed that sets of genes required for IAA and GA synthesis were coordinately expressed during the later stages of MS/POL development, suggesting that these genes are responsible for the massive accumulation of IAA and GA(4) in the mature anther. In contrast, genes for GA signaling were preferentially expressed during the early developmental stages of MS/POL and throughout TAP development, while their expression was down-regulated at the later stages of MS/POL development. In the case of auxin signaling genes, such mirror-imaged expression observed in GA synthesis and signaling gen...Continue Reading

References

Apr 1, 1991·Molecular & General Genetics : MGG·J KogaH Hidaka
Sep 12, 1995·Proceedings of the National Academy of Sciences of the United States of America·E BellJ E Mullet
Oct 1, 1993·The Plant Cell·R B GoldbergP M Sanders
Aug 20, 1996·Proceedings of the National Academy of Sciences of the United States of America·S E JacobsenN E Olszewski
Jun 20, 1997·Science·S H SchwartzD R McCarty
Sep 1, 1997·Nucleic Acids Research·S F AltschulD J Lipman
Dec 9, 1998·Proceedings of the National Academy of Sciences of the United States of America·M B EisenD Botstein
Dec 28, 1999·Proceedings of the National Academy of Sciences of the United States of America·M M NeffJ Chory
Mar 9, 2000·Trends in Plant Science·M C DrewP W Morgan
Apr 1, 2000·The Plant Journal : for Cell and Molecular Biology·H MaucherC Wasternack
Sep 6, 2000·Proceedings of the National Academy of Sciences of the United States of America·A Stintzi, J Browse
Oct 26, 2000·Proceedings of the National Academy of Sciences of the United States of America·M SeoT Koshiba
Feb 24, 2001·Plant Molecular Biology·A FathR Jones
Feb 24, 2001·Plant Molecular Biology·T E Young, D R Gallie
Feb 24, 2001·Plant Molecular Biology·B Rubinstein
Apr 5, 2001·Proceedings of the National Academy of Sciences of the United States of America·H S SeoY D Choi
Jul 5, 2001·Proceedings of the National Academy of Sciences of the United States of America·H ItohM Kobayashi
Aug 13, 2002·The Plant Cell·Miguel González-GuzmánPedro L Rodríguez
Mar 20, 2003·Plant Physiology·Shihshieh HuangLinda A Ness
Jun 5, 2003·Plant Molecular Biology·Irene StenzelClaus Wasternack
Jun 6, 2003·Plant Cell Reports·E Zazimalova, R M Napier

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Citations

Mar 12, 2010·Journal of Plant Research·Hirokazu TakahashiMikio Nakazono
Apr 28, 2010·Proceedings of the National Academy of Sciences of the United States of America·Tadashi SakataAtsushi Higashitani
Jan 16, 2013·Proceedings of the National Academy of Sciences of the United States of America·Hiroshi MagomeShinjiro Yamaguchi
Apr 11, 2009·DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes·Toshio YamamotoMasahiro Yano
Mar 7, 2009·Journal of Experimental Botany·Effie Mutasa-Göttgens, Peter Hedden
Mar 27, 2009·Journal of Experimental Botany·Zoe A Wilson, Da-Bing Zhang
Jan 24, 2012·Journal of Experimental Botany·Maria João Pimenta LangeTheo Lange
Oct 27, 2009·Nucleic Acids Research·Motohiro MiharaTakeshi Izawa
Nov 11, 2010·Plant & Cell Physiology·Masahiro FujitaNori Kurata
Jul 12, 2011·Plant & Cell Physiology·Ming-Der HuangAnthony H C Huang
Jan 15, 2013·Plant & Cell Physiology·Toru KudoHitoshi Sakakibara
Sep 21, 2012·Molecular Plant-microbe Interactions : MPMI·Xue QinYou Liang Peng
Feb 15, 2011·Genes & Genetic Systems·Keita SuwabeMasao Watanabe
Jun 12, 2012·Journal of Experimental Botany·Pedro M BarrosM Margarida Oliveira
Aug 10, 2011·Trends in Plant Science·Andrew R G PlackettPeter Hedden
Oct 8, 2015·Trends in Plant Science·Jianxin ShiDabing Zhang
Mar 28, 2012·The Plant Journal : for Cell and Molecular Biology·Anja SchmidtUeli Grossniklaus
Sep 13, 2012·Plant Biotechnology Journal·Makoto HakataHiromoto Yamakawa
Sep 8, 2011·The Plant Journal : for Cell and Molecular Biology·Hinako TakehisaYoshiaki Nagamura
Jan 10, 2014·The New Phytologist·Andrew R G PlackettStephen G Thomas
Nov 6, 2013·The New Phytologist·Yuko OgoNaoko K Nishizawa

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Methods Mentioned

BETA
transgenic

Software Mentioned

Cluster
SPINDLY
BLAST
R
TreeView
ClustalW

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