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Considering transposable element diversification in de novo annotation approaches

PloS One

Feb 10, 2011

Timothée FlutreHadi Quesneville

Abstract

Transposable elements (TEs) are mobile, repetitive DNA sequences that are almost ubiquitous in prokaryotic and eukaryotic genomes. They have a large impact on genome structure, function and evolution. With the recent development of high-throughput sequencing methods, many genome sequenc...read more

Mentioned in this Paper

Severe Acute Respiratory Syndrome
Short Interspersed Nucleotide Elements
Short Tandem Repeat
Aphis chenopodii glauci preparation
Mites
Hemorrhoids
Exons
Genome
Segmental Duplications, Genomic
Transposition of Intestine (Disorder)
Paper Details
References
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  • Citations109
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  • References67
  • Citations109
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Considering transposable element diversification in de novo annotation approaches

PloS One

Feb 10, 2011

Timothée FlutreHadi Quesneville

PMID: 21304975

DOI: 10.1371/journal.pone.0016526

Abstract

Transposable elements (TEs) are mobile, repetitive DNA sequences that are almost ubiquitous in prokaryotic and eukaryotic genomes. They have a large impact on genome structure, function and evolution. With the recent development of high-throughput sequencing methods, many genome sequenc...read more

Mentioned in this Paper

Severe Acute Respiratory Syndrome
Short Interspersed Nucleotide Elements
Short Tandem Repeat
Aphis chenopodii glauci preparation
Mites
Hemorrhoids
Exons
Genome
Segmental Duplications, Genomic
Transposition of Intestine (Disorder)

Similar Papers Found In These Feeds

Viral Hemorrhagic Fevers

Viral Hemorrhagic Fevers caused by ebola, marburg and lassa viruses often manifest as multiple organ dysfunction and hemorrhagic shock with high mortality. Discover the latest research on Viral Hemorrhagic Fevers here.

Transposons for Gene Editing

Transposons can replicate and spread through the host’s genome and therefore be used as a genetic tool for analysis of gene function. Discover the latest research on the use of transposons for gene editing here.

Related Papers

Briefings in Bioinformatics

Discovering and detecting transposable elements in genome sequences

Briefings in BioinformaticsOctober 13, 2007
Casey M Bergman, Hadi Quesneville
International Journal of Bioinformatics Research and Applications

An algorithm for the reconstruction of consensus sequences of ancient segmental duplications and transposon copies in eukaryotic genomes

International Journal of Bioinformatics Research and ApplicationsMarch 13, 2010
Abanish SinghNikola Stojanovic
Paper Details
References
  • References67
  • Citations109
12345...
  • References67
  • Citations109
12345...
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