Cupriavidus agavae sp. nov., a species isolated from Agave L. rhizosphere in northeast Mexico

International Journal of Systematic and Evolutionary Microbiology
Ivan Arroyo-HerreraPaulina Estrada-de Los Santos

Abstract

During the isolation of bacteria from the Agave L. rhizosphere in northeast Mexico, four strains with similar BOX-PCR patterns were collected. The 16S rRNA gene sequences of all four strains were very similar to each other and that of the type strains of Cupriavidus metallidurans CH34T (98.49 % sequence similarity) and Cupriavidus necator N-1T (98.35 %). The genome of strain ASC-9842T was sequenced and compared to those of other Cupriavidus species. ANIb and ANIm values with the most closely related species were lower than 95%, while the in silico DNA-DNA hybridization values were also much lower than 70 %, consistent with the proposal that they represent a novel species. This conclusion was supported by additional phenotypic and chemotaxonomic analyses. Therefore, the name Cupriavidus agavae sp. nov. is proposed with the type strain ASC-9842T (=LMG 26414T=CIP 110327T).

References

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Apr 9, 2019·PLoS Computational Biology·Remco BouckaertAlexei J Drummond

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Citations

Apr 14, 2021·International Journal of Systematic and Evolutionary Microbiology·Oh Joo KweonMi-Kyung Lee
Oct 1, 2020·Systematic and Applied Microbiology·Erika Yanet Tapia-GarcíaPaulina Estrada de Los Santos

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