Double introduction of highly pathogenic H5N1 avian influenza virus into France in early 2006

Avian Pathology : Journal of the W.V.P.A
Ghislaine Le Gall-ReculéVéronique Jestin

Abstract

Highly pathogenic avian influenza (HPAI) viruses of subtype H5N1 have spread since late 2003 in East and Southeast Asia. In April 2005, a large-scale outbreak of H5N1 infection that occurred in migratory waterfowl in Qinghai Lake nature reserve in western China, killing more than 6000 wild birds, appeared to be the beginning of a epizootic that caused outbreaks in domestic and wild birds in nearly 60 countries from Central Asia, the Middle East, Europe and Africa. The first case of Asian lineage HPAI H5N1 virus in France was described in dead wild ducks (Common pochard) in the east of France in mid-February 2006. Up to the end of April, 42 HPAI H5N1 viruses were identified from about 60 wild birds belonging to different species and one outbreak occurred in commercial turkeys. To establish genetic relationships with other HPAI H5N1 viruses, 12 selected viruses were subjected to phylogenetic analysis. Genotyping and genetic analyses revealed that the French viruses were very similar to those of the 'Qinghai-like' sublineage and belonged to clade 2.2. However, two related but distinct genetic subgroups were identified, indicating that two different viruses were circulating in France at the same time and in the same area. Viruses o...Continue Reading

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Datasets Mentioned

BETA
AM236074
EF395820
EF395821
AM49605
AM498616
AM498617
AM498627
AM498628
AM498632
AM231714

Methods Mentioned

BETA
PCR
PCRs
electrophoresis

Software Mentioned

BLAST
CONSENSE
PHYLIP
CLUSTALW
MEGA

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