Draft Genome Sequence of a "Candidatus Brocadia" Bacterium Enriched from Activated Sludge Collected in a Tropical Climate

Genome Announcements
Xianghui LiuRohan B H Williams

Abstract

Here, we present the draft genome sequence of an anaerobic ammonium-oxidizing bacterium (AnAOB), "Candidatus Brocadia," which was enriched in an anammox reactor. A 3.2-Mb genome sequence comprising 168 contigs was assembled, in which 2,765 protein-coding genes, 47 tRNAs, and one each of 5S, 16S, and 23S rRNAs were annotated. No evidence for the presence of a nitric oxide-forming nitrite reductase was found.

References

May 5, 2012·Bioinformatics·Elmar PruesseFrank Oliver Glöckner
Dec 6, 2012·FEMS Microbiology Reviews·Boran KartalJan T Keltjens
Mar 20, 2014·Bioinformatics·Torsten Seemann
Sep 15, 2014·Nature Methods·Johannes AlnebergChristopher Quince
Dec 1, 2015·Environmental Microbiology·Mamoru OshikiSatoshi Okabe
Apr 1, 2016·Nature Communications·Daan R SpethMike S M Jetten
Sep 28, 2016·Trends in Biochemical Sciences·Boran Kartal, Jan T Keltjens
Dec 10, 2016·Genome Announcements·Muhammad AliPascal E Saikaly

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Datasets Mentioned

BETA
PJZV00000000
PRJNA383754

Software Mentioned

CheckM
Newbler
SILVA Incremental Aligner ( SINA )
CheckM SSUfinder
Prokka
CONCOCT
RiboTagger

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