Draft Genome Sequence of a Fungus (Fusarium tricinctum) Cultured from a Monoisolate Native to the Himalayas

Genome Announcements
Narendra MeenaKrishna Mohan Medicherla

Abstract

Here, we report the draft de novo genome sequence assembly of Fusarium tricinctum (strain T6), using IonTorrent sequencing chemistry and an Ion 530 chip ExT kit for sequencing. The genome assembly resulted in 42,732,204 bp from a total 6.62 Gb, with a median read length of 386 bp.

References

Jan 11, 2011·Bioinformatics·Oliver KellerStephan Waack
Apr 18, 2012·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Anton BankevichPavel A Pevzner
Apr 4, 2014·Bioinformatics·Anthony M BolgerBjoern Usadel
Jun 11, 2015·Bioinformatics·Felipe A SimãoEvgeny M Zdobnov
May 7, 2016·Bioinformatics·Elias DohmenCarsten Kemena

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Citations

Aug 31, 2020·Critical Reviews in Biotechnology·Anamika DubeyMohammad Latif Khan
Apr 2, 2021·Frontiers in Bioengineering and Biotechnology·Rosa SagitaKristina Haslinger

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Datasets Mentioned

BETA
PTXX00000000

Software Mentioned

Trimmomatic
Benchmarking Universal Single Orthologs ( BUSCO )
MIRA
SPAdes
Mimicking Intelligent Reads Assembly ( MIRA )
AUGUSTUS

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