Draft Genome Sequence of Janthinobacterium sp. Ant5-2-1, Isolated from Proglacial Lake Podprudnoye in the Schirmacher Oasis of East Antarctica

Genome Announcements
Hyunmin KooAsim K Bej

Abstract

Janthinobacterium sp. Ant5-2-1, isolated from the Schirmacher Oasis of East Antarctica, produces a purple-violet pigment, manifests diverse energy metabolism abilities, and tolerates cold, ultraviolet radiation, and other environmental stressors. We report here the 6.19-Mb draft genome of strain Ant5-2-1, which will help understand its survival mechanisms in extreme Antarctic ecosystems.

References

Jan 6, 2004·Nucleic Acids Research·Dean Laslett, Bjorn Canback
Apr 25, 2007·Nucleic Acids Research·Karin LagesenDavid W Ussery
Feb 12, 2008·BMC Genomics·Ramy K AzizOlga Zagnitko
Mar 20, 2008·Genome Research·Daniel R Zerbino, Ewan Birney
Jun 18, 2010·Antonie van Leeuwenhoek·Nazia MojibAsim K Bej
Sep 14, 2010·Current Protocols in Bioinformatics·Daniel R Zerbino
Mar 21, 2013·Extremophiles : Life Under Extreme Conditions·Nazia MojibAsim K Bej
Apr 4, 2014·Bioinformatics·Anthony M BolgerBjoern Usadel

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Methods Mentioned

BETA
environmental stress

Software Mentioned

tRNAscan
Velvet
Trimmomatic
antiSMASH
RNAmmer
SE
Rapid Annotations using Subsystem Technology ( RAST )
FastQC
VelvetOptimiser
Cutadapt

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