Draft genomes of Nautella italica strains CECT 7645(T) and CECT 7321: Two roseobacters with potential pathogenic and biotechnological traits

Marine Genomics
Lidia Rodrigo-TorresDavid R Arahal

Abstract

Nautella italica is a member of the family Rhodobacteraceae described in 2009. Strain LMG 24365(T) (=CECT 7645(T), =DSM 26436(T), =CCUG 55857(T)) was isolated from a marine electroactive biofilm growing in a stainless steel cathode exposed to natural water in Genoa, Italy. Strain AD 41 (=CECT 7321) was isolated from water surrounding cultivated gilthead seabream larvae in Cádiz, Spain. The genomes of strains CECT 7645(T) and CECT 7321 were sequenced, assembled, annotated and compared. Here we describe the most relevant findings: biofilm formation, quorum sensing, resistance to multiple drugs, heavy metals and oxidative stress, cytotoxins, and poly-β-hydroxybutyrate (PHB) production genes. These genomes were also compared to current available genomes in NCBI Genome Database from members of the genus Nautella, Nautella sp. R11 and Nautella sp. ECSMB14104. The comparison showed a higher similarity between strains CECT 7645(T) and R11 compared to strain CECT 7321 and strain ECSMB14104. The genome similarity indexes allowed confirming and assigning strains CECT 7321, R11 and ECSMB14104 to the species N. italica.

References

Jul 16, 2002·Infection and Immunity·Jeremy S BrownDavid W Holden
Feb 27, 2004·Nucleic Acids Research·Wolfgang LudwigKarl-Heinz Schleifer
Mar 27, 2007·Nature Reviews. Microbiology·Eugene RosenbergIlana Zilber-Rosenberg
May 12, 2007·Current Opinion in Biotechnology·Michail M YakimovPeter N Golyshin
May 29, 2007·Applied and Environmental Microbiology·M A MoranA Buchan
Jun 1, 2007·Nucleic Acids Research·Ibtissem GrissaChristine Pourcel
Feb 12, 2008·BMC Genomics·Ramy K AzizOlga Zagnitko
Aug 12, 2008·Systematic and Applied Microbiology·Pablo YarzaRamon Rosselló-Móra
Mar 31, 2009·International Journal of Systematic and Evolutionary Microbiology·Ilse VandecandelaerePeter Vandamme
Oct 27, 2009·Proceedings of the National Academy of Sciences of the United States of America·Michael Richter, Ramon Rosselló-Móra
Jun 10, 2010·FEMS Microbiology Reviews·Irena LinhartováPeter Sebo
Oct 16, 2010·Environmental Microbiology·Rebecca J CaseStaffan Kjelleberg
Oct 1, 2011·Nature Methods·Thomas Nordahl PetersenHenrik Nielsen
Dec 6, 2011·International Journal of Systematic and Evolutionary Microbiology·Ok-Sun KimJongsik Chun
Apr 18, 2012·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Anton BankevichPavel A Pevzner
May 4, 2013·Applied Microbiology and Biotechnology·Sung-Hwan EomSe-Kwon Kim
Jul 23, 2013·Applied and Environmental Microbiology·Kelly L RoeKatherine A Barbeau
Mar 13, 2014·Bioinformatics·Gianmauro CuccuruGiorgio Fotia
Mar 20, 2014·Bioinformatics·Torsten Seemann
Nov 22, 2014·Nucleic Acids Research·Aron Marchler-BauerStephen H Bryant
Feb 19, 2015·MBio·Clémentine DressaireCecília Maria Arraiano
Jul 25, 2015·Marine Genomics·Rimantas Kodzius, Takashi Gojobori
Sep 28, 2015·World Journal of Microbiology & Biotechnology·E GerbinoA Gómez-Zavaglia

❮ Previous
Next ❯

Related Concepts

Related Feeds

Biofilm & Infectious Disease

Biofilm formation is a key virulence factor for a wide range of microorganisms that cause chronic infections.Here is the latest research on biofilm and infectious diseases.

CRISPR (general)

Clustered regularly interspaced short palindromic repeats (CRISPR) are DNA sequences in the genome that are recognized and cleaved by CRISPR-associated proteins (Cas). CRISPR-Cas system enables the editing of genes to create or correct mutations. Discover the latest research on CRISPR here.

Antifungals

An antifungal, also known as an antimycotic medication, is a pharmaceutical fungicide or fungistatic used to treat and prevent mycosis such as athlete's foot, ringworm, candidiasis, cryptococcal meningitis, and others. Discover the latest research on antifungals here.

CRISPR Ribonucleases Deactivation

CRISPR-Cas system enables the editing of genes to create or correct mutations. This feed focuses on mechanisms that underlie deactivation of CRISPR ribonucleases. Here is the latest research.

ABC Transporters & Multidrug Resistance

ABC Transporters or ATP-Binding Cassette Transporters are responsible for pumping out antibiotics in the cell and can lead to multidrug resistance in bacteria. Discover the latest research on ABC Transporters & Multidrug Resistance here.

CRISPRi Screens for Antibiotics

The CRISPR-Cas system is a gene editing technique that can be used for high-throughput genome-wide screens to identify modes of actions of novel antibiotics. Here is the latest research.

Biofilms

Biofilms are adherent bacterial communities embedded in a polymer matrix and can cause persistent human infections that are highly resistant to antibiotics. Discover the latest research on Biofilms here.

Antifungals (ASM)

An antifungal, also known as an antimycotic medication, is a pharmaceutical fungicide or fungistatic used to treat and prevent mycosis such as athlete's foot, ringworm, candidiasis, cryptococcal meningitis, and others. Discover the latest research on antifungals here.