Evolution with material symbol systems

Bio Systems
Luis Mateus Rocha

Abstract

Pattee's semantic closure principle is used to study the characteristics and requirements of evolving material symbols systems. By contrasting agents that reproduce via genetic variation with agents that reproduce via self-inspection, we reach the conclusion that symbols are necessary to attain open-ended evolution, but only if the phenotypes of agents are the result of a material, self-organization process. This way, a study of the inter-dependencies of symbol and matter is presented. This study is based first on a theoretical treatment of symbolic representations, and secondly on simulations of simple agents with matter-symbol inter-dependencies. The agent-based simulations use evolutionary algorithms with indirectly encoded phenotypes. The indirect encoding is based on Fuzzy Development programs, which are procedures for combining fuzzy sets in such a way as to model self-organizing development processes.

References

Jan 1, 1990·Bio Systems·M Conrad
Dec 1, 1968·Journal of Molecular Biology·F H Crick
Jun 1, 1966·The Bulletin of Mathematical Biophysics·B S Guttman
Feb 1, 1967·Journal of Theoretical Biology·M A Arbib
Apr 28, 2001·Bio Systems·J Hoffmeyer
Nov 1, 1961·Biophysical Journal·H H PATTEE

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Citations

Aug 21, 2007·Evolutionary Computation·Chien-feng HuangLuis M Rocha
Aug 13, 2005·Theoretical Biology & Medical Modelling·David L Abel, Jack T Trevors
Dec 8, 2007·Theoretical Biology & Medical Modelling·Kirk K DurstonJack T Trevors
Dec 5, 2009·Theoretical Biology & Medical Modelling·David L Abel
Apr 1, 2009·International Journal of Molecular Sciences·David L Abel
Oct 17, 2006·Journal of Evolutionary Biology·G A HoelzerJ W Pepper
Apr 7, 2005·Artificial Life·Luis Mateus Rocha, Wim Hordijk
Jan 1, 2011·Life·David L Abel

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