Expertomica Cells: analysis of cell monolayer development

Bioinformatics
Tomás LevitnerDalibor Stys

Abstract

Expertomica Cells is a program for the creation and analysis of pedigree plots from time-lapse micrographs of cell monolayers. It enables recording the basic events in a cell cycle, cell neighbourhoods and spatial migration. The output is both numeric and graphical. The software helps to lower main hurdles in the manual analysis of cell monolayer development to practical limits; it reduces the operator processing time of typical experiment containing 5000 consecutive images from the usual 3 months to 3-10 h. Freely available on the web at http://www.expertomicacells.tk or http://www.expertomicacells.wu.cz. The source code is implemented in JAVA 6 and supported by Linux, Mac and MS Windows. Supplementary data available at Bioinformatics online.

References

Sep 7, 2007·PLoS Biology·Benjamin B KaufmannAlexander van Oudenaarden
Jul 11, 2009·Science·Amit TzurMarc W Kirschner

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Citations

Sep 1, 2011·Molecular BioSystems·Dalibor StysPetr Cisar

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