Expression pattern and subcellular localization of the ovate protein family in rice

PloS One
Hui YuMingdi Bian

Abstract

The Arabidopsis ovate family proteins (AtOFPs) have been shown to function as transcriptional repressors and regulate multiple aspects of plant growth and development. There are 31 genes that encode the full-length OVATE-domain containing proteins in the rice genome. In this study, the gene structure analysis revealed that OsOFPs are intron poor. Phylogenetic analysis suggested that OVATE proteins from rice, Arabidopsis and tomato can be divided into 4 groups (I-IV). Real-time quantitative polymerase chain reaction (RT-qPCR) analysis identified OsOFPs with different tissue-specific expression patterns at all stages of development in the rice plant. Interestingly, nearly half of the total number of OsOFP family was more highly expressed during the seed developmental stage. In addition, seed developmental cis-elements were found in the promoter region of the OsOFPs. Subcellular localization analysis revealed that YFP-OsOFP fusion proteins predominantly localized in the nucleus. Our results suggest that OsOFPs may act as regulatory proteins and play pivotal roles in the growth and development of rice.

References

Jul 23, 1996·Proceedings of the National Academy of Sciences of the United States of America·Y SatoM Matsuoka
Dec 10, 1998·Nucleic Acids Research·S RombautsP Rouzé
Jan 27, 2000·Cell·M P Scott
Dec 19, 2001·Cell·A M Hetherington
Jun 5, 2002·The Plant Cell·Ruth R FinkelsteinChristopher D Rock
Sep 12, 2002·Annual Review of Plant Biology·Jian-Kang Zhu
Sep 21, 2002·Proceedings of the National Academy of Sciences of the United States of America·Jiping LiuSteven D Tanksley
Dec 18, 2004·Plant Molecular Biology·Suzanne J H KuijtAnnemarie H Meijer
Dec 22, 2004·The Plant Journal : for Cell and Molecular Biology·Olga A KorolevaJohn H Doonan
Feb 26, 2005·Bioinformatics·Anyuan GuoJingchu Luo
Mar 23, 2005·Proceedings of the National Academy of Sciences of the United States of America·Jana HackbuschJoachim F Uhrig
Jun 6, 2006·Proteins·Chin-Sheng YuJenn-Kang Hwang
Apr 28, 2007·The Plant Journal : for Cell and Molecular Biology·Shucai WangJin-Gui Chen
May 23, 2007·Nucleic Acids Research·Paul HortonKenta Nakai
Aug 8, 2007·Developmental Cell·Srinivas S GampalaZhi-Yong Wang
Aug 8, 2007·Yi chuan = Hereditas·An-Yuan GuoJing-Chu Luo
Aug 19, 2008·The Plant Cell·Chuan-yin WuRoger I Pennell
Nov 5, 2008·The Plant Journal : for Cell and Molecular Biology·Motoyasu YoshiiToshihiro Omura
Oct 28, 2009·Nucleic Acids Research·Paulino Pérez-RodríguezBernd Mueller-Roeber
Mar 3, 2010·Annual Review of Plant Biology·Tae-Wuk Kim, Zhi-Yong Wang
Sep 9, 2010·Development·Angela Hay, Miltos Tsiantis
Jan 11, 2011·Plant & Cell Physiology·Yoshiaki NagamuraHirohiko Hirochika
Mar 16, 2011·BMC Plant Biology·Aphrodite TsaballaAthanasios S Tsaftaris
Apr 5, 2011·The Plant Journal : for Cell and Molecular Biology·Eryang LiCarl J Douglas
Jan 3, 2012·Plant Physiology·Hitoshi NakagawaMasaki Mori
Jan 13, 2012·Proceedings of the National Academy of Sciences of the United States of America·Cezary SmaczniakKerstin Kaufmann

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Citations

Apr 12, 2016·Frontiers in Plant Science·Shucai WangBrian Ellis
Sep 26, 2017·Plant Biotechnology Journal·Juhua LiuZhiqiang Jin
Jan 18, 2020·The Plant Journal : for Cell and Molecular Biology·Yunhua XiaoChengcai Chu
Dec 6, 2017·The Plant Journal : for Cell and Molecular Biology·Chao YangJianxiong Li
Mar 29, 2018·Nature Communications·Dong-Sheng ZhaoQiao-Quan Liu
Feb 23, 2020·International Journal of Molecular Sciences·Yanping WangLi Zhang
Nov 11, 2018·Nature Communications·Shan WuEsther van der Knaap
Feb 12, 2021·Frontiers in Plant Science·Cristina P Fernández-BacaJinyoung Y Barnaby
Oct 23, 2020·Physiology and Molecular Biology of Plants : an International Journal of Functional Plant Biology·Baopeng DingLiulin Li

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Methods Mentioned

BETA
transfection
PCR

Software Mentioned

Gene Structure Display Server
ImageJ
ClustalX
MEGA
WoLF PSORT
AtOFPs
OVATE
CELLO

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