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FinisherSC : A repeat-aware tool for upgrading de-novo assembly using long reads

bioRxiv

Oct 14, 2014

Ka Kit LamDavid N C Tse

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Abstract

We introduce FinisherSC, which is a repeat-aware and scalable tool for upgrading de-novo assembly using long reads. Experiments with real data suggest that FinisherSC can provide longer and higher quality contigs than existing tools while maintaining high concordance.

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Research Study
Molecular Assembly/Self Assembly
28
Paper Details
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  • FinisherSC : A repeat-aware tool for upgrading de-novo assembly using long reads

    bioRxiv

    Oct 14, 2014

    Ka Kit LamDavid N C Tse

    PMID: 990010215

    DOI: 10.1101/010215

    Abstract

    We introduce FinisherSC, which is a repeat-aware and scalable tool for upgrading de-novo assembly using long reads. Experiments with real data suggest that FinisherSC can provide longer and higher quality contigs than existing tools while maintaining high concordance.

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    Research Study
    Molecular Assembly/Self Assembly
    28
    Paper Details
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