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Flexible analysis of transcriptome assemblies with Ballgown

bioRxiv

Mar 30, 2014

Alyssa C FrazeeJeffrey T. Leek

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Abstract

We have built a statistical package called Ballgown for estimating differential expression of genes, transcripts, or exons from RNA sequencing experiments. Ballgown is designed to work with the popular Cufflinks transcript assembly software and uses well-motivated statistical methods to...read more

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Computer Software
Study
Protein Isoforms
RNA
Research Study
Statistical Analysis
Molecular Assembly/Self Assembly
Genes
Transcriptome
Exons
50
116
Paper Details
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  • Flexible analysis of transcriptome assemblies with Ballgown

    bioRxiv

    Mar 30, 2014

    Alyssa C FrazeeJeffrey T. Leek

    PMID: 990003665

    DOI: 10.1101/003665

    Abstract

    We have built a statistical package called Ballgown for estimating differential expression of genes, transcripts, or exons from RNA sequencing experiments. Ballgown is designed to work with the popular Cufflinks transcript assembly software and uses well-motivated statistical methods to...read more

    Mentioned in this Paper

    Computer Software
    Study
    Protein Isoforms
    RNA
    Research Study
    50
    116
    Paper Details
    References
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