FlyTED: the Drosophila Testis Gene Expression Database.

Nucleic Acids Research
Jun ZhaoDavid Shotton

Abstract

FlyTED, the Drosophila Testis Gene Expression Database, is a biological research database for gene expression images from the testis of the fruit fly Drosophila melanogaster. It currently contains 2762 mRNA in situ hybridization images and ancillary metadata revealing the patterns of gene expression of 817 Drosophila genes in testes of wild type flies and of seven meiotic arrest mutant strains in which spermatogenesis is defective. This database has been built by adapting a widely used digital library repository software system, EPrints (http://eprints.org/software/), and provides both web-based search and browse interfaces, and programmatic access via an SQL dump, OAI-PMH and SPARQL. FlyTED is available at http://www.fly-ted.org/.

References

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Dec 9, 2008·Briefings in Bioinformatics·Jun ZhaoDavid Shotton

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Citations

Jul 16, 2010·Development Genes and Evolution·Csaba AdámViktor Dombrádi
Mar 9, 2011·Proceedings of the National Academy of Sciences of the United States of America·Guanjun GaoYikang S Rong
Dec 8, 2010·Bioinformatics·M MiquelC M Vicient
Jun 12, 2013·PLoS Genetics·Simona CaporilliHelen White-Cooper
Dec 24, 2013·Genome Biology·Ann S HammondsSusan E Celniker
Nov 14, 2013·Journal of Molecular Evolution·Josephine A Reinhardt, Corbin D Jones
Mar 8, 2013·Developmental Biology·Bridlin BarckmannRenate Renkawitz-Pohl
May 7, 2014·Methods : a Companion to Methods in Enzymology·Rafael S DemarcoD Leanne Jones
Oct 5, 2013·Biochimica Et Biophysica Acta·Christina RathkeRenate Renkawitz-Pohl
Jun 13, 2012·Biochimica Et Biophysica Acta·Michael Primig
Jun 13, 2012·G3 : Genes - Genomes - Genetics·Katie AdolphsenSandra R Schulze
Mar 14, 2021·Genetics·Stephanie E MohrNorbert Perrimon

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Methods Mentioned

BETA
PCR

Software Mentioned

BDGP
FlyTED
OpenFlyData
MISFISHIE
EPrints
FlyAtlas

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