Genome characterization of the newly identified maize-associated totivirus Anhui

Archives of Virology
Ibukun A AkinyemiQingfa Wu

Abstract

Maize-associated totivirus Anhui (MATV-Ah) is a novel totivirus with a 5536-nt genome and two large ORFs that encode a putative coat protein (CP) and an RNA-dependent RNA polymerase (RdRP). The two ORFs share amino acid identities of 32 and 56% when compared to other plant-associated totiviruses, respectively. Based on genome sequence similarity and phylogenetic analysis, MATV-Ah is proposed to be a member of the family Totiviridae genus Totivirus.

References

Jan 19, 2010·Proceedings of the National Academy of Sciences of the United States of America·Qingfa WuShou-Wei Ding
Sep 14, 2010·Current Protocols in Bioinformatics·Daniel R Zerbino
Oct 18, 2013·Molecular Biology and Evolution·Koichiro TamuraSudhir Kumar
Nov 13, 2015·Archives of Virology·Sha ChenXueping Zhou
Jan 19, 2016·Frontiers in Microbiology·Tim LachnitPeter Steinberg

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Citations

May 16, 2020·Frontiers in Plant Science·Katarzyna Otulak-KoziełRodrigo A Valverde

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Datasets Mentioned

BETA
MH055436

Software Mentioned

Velvet
BLAST
BLASTx
tBLASTx
MEGA
ORF Finder

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