Genome-enabled perspectives on the composition, evolution, and expression of virulence determinants in bacterial plant pathogens

Annual Review of Phytopathology
Magdalen Lindeberg

Abstract

Genome sequence analyses of bacterial plant pathogens are revealing important insights into the molecular determinants of pathogenicity and, through transcript characterization, responses to environmental conditions, evidence for small RNAs, and validation of uncharacterized genes. Genome comparison sheds further light on the processes impacting pathogen evolution and differences in gene repertoire among isolates contributing to niche specialization. Information derived from pathogen genome analysis is providing tools for use in diagnosis and interference with host-pathogen interactions for the purpose of disease control. However, the existing information infrastructure fails to adequately integrate the increasing numbers of sequence data sets, bioinformatic analyses, and experimental characterization, as required for effective systems-level analysis. Enhanced standardization of data formats at the point of publication is proposed as a possible solution.

References

Jul 28, 1995·Science·R D FleischmannJ M Merrick
Oct 1, 1996·Proceedings of the National Academy of Sciences of the United States of America·D W HoodE R Moxon
Oct 6, 2000·Annual Review of Microbiology·J Hacker, J B Kaper
Feb 2, 2002·Nature·M SalanoubatC A Boucher
Dec 10, 2002·Proceedings of the National Academy of Sciences of the United States of America·R A WelchF R Blattner
Aug 21, 2003·Proceedings of the National Academy of Sciences of the United States of America·C Robin BuellAlan Collmer
Feb 3, 2004·Proceedings of the National Academy of Sciences of the United States of America·Karyn L NewmanSteven E Lindow
Jul 21, 2004·Proceedings of the National Academy of Sciences of the United States of America·K S BellI K Toth
Aug 13, 2004·Molecular Plant-microbe Interactions : MPMI·Claudia B Monteiro-VitorelloJoão C Setúbal
Jul 27, 2005·Proceedings of the National Academy of Sciences of the United States of America·Helene FeilSteven E Lindow
Dec 20, 2005·Current Biology : CB·Andrew R PitmanDawn L Arnold
Jan 13, 2006·Molecular Plant-microbe Interactions : MPMI·Dean W GabrielNatalia Mikhailova
Mar 7, 2006·Applied and Environmental Microbiology·Anne-Marie GrenierYvan Rahbé
Mar 8, 2006·Mutation Research·M BicharaI B Lambert
May 12, 2006·Proceedings of the National Academy of Sciences of the United States of America·Eric E SmithMaynard V Olson
Jun 30, 2006·Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases·Cindy E MorrisDavid C Sands
Aug 31, 2006·Cellular Microbiology·Ohad Gal-Mor, B Brett Finlay
Sep 5, 2006·Genetics·Sara F SarkarDavid S Guttman
Sep 20, 2006·Proceedings of the National Academy of Sciences of the United States of America·Aurélie AngotStéphane Genin

❮ Previous
Next ❯

Citations

May 9, 2012·Annual Review of Phytopathology·Pietro D Spanu
Aug 1, 2018·Natural Product Reports·Florian BaldewegMarkus Nett
Aug 20, 2020·Proceedings. Biological Sciences·James M DoonanJames E McDonald
Sep 23, 2020·PloS One·Sharifa G CrandallDenis S Willett

❮ Previous
Next ❯

Methods Mentioned

BETA
immunoprecipitation
RNA-Seq
transgenic

Software Mentioned

GMOD ( Generic Model Organism Database )
UCSC browser
Artemis
GBrowse Genomics Browser

Related Concepts

Related Feeds

CRISPR & Staphylococcus

CRISPR-Cas system enables the editing of genes to create or correct mutations. Staphylococci are associated with life-threatening infections in hospitals, as well as the community. Here is the latest research on how CRISPR-Cas system can be used for treatment of Staphylococcal infections.

© 2021 Meta ULC. All rights reserved