Gibberellic acid and cGMP-dependent transcriptional regulation in Arabidopsis thaliana.

Plant Signaling & Behavior
René BastianChris Gehring

Abstract

An ever increasing amount of transcriptomic data and analysis tools provide novel insight into complex responses of biological systems. Given these resources we have undertaken to review aspects of transcriptional regulation in response to the plant hormone gibberellic acid (GA) and its second messenger guanosine 3',5'-cyclic monophosphate (cGMP) in Arabidopsis thaliana, both wild type and selected mutants. Evidence suggests enrichment of GA-responsive (GARE) elements in promoters of genes that are transcriptionally upregulated in response to cGMP but downregulated in a GA insensitive mutant (ga1-3). In contrast, in the genes upregulated in the mutant, no enrichment in the GARE is observed suggesting that GARE motifs are diagnostic for GA-induced and cGMP-dependent transcriptional upregulation. Further, we review how expression studies of GA-dependent transcription factors and transcriptional networks based on common promoter signatures derived from ab initio analyses can contribute to our understanding of plant responses at the systems level.

References

Apr 15, 1992·Proceedings of the National Academy of Sciences of the United States of America·S Gilroy, R L Jones
Aug 15, 1991·Proceedings of the National Academy of Sciences of the United States of America·K SkriverJ Mundy
Mar 1, 1995·The Journal of General Physiology·T Hoshi
Sep 13, 1994·Proceedings of the National Academy of Sciences of the United States of America·J J EstruchL Crossland
Apr 29, 2000·Nature·M A Blázquez, D Weigel
May 4, 2001·Trends in Plant Science·T Munnik
Aug 14, 2001·Plant Physiology·P MäserM L Guerinot
Aug 23, 2001·Proceedings of the National Academy of Sciences of the United States of America·A MoutinhoR Malhó
Sep 22, 2001·Current Biology : CB·K Lindsey
Nov 1, 2001·Annual Review of Cell and Developmental Biology·P K HeplerA Y Cheung
Dec 18, 2001·Plant Physiology·F J Maathuis, D Sanders
Dec 18, 2001·Plant Physiology·G F GocalR W King
Jul 1, 1997·The Plant Cell·H. Kende, JAD. Zeevaart
Dec 7, 2002·The Plant Cell·Davinder P SinghStephen M Swain
Feb 13, 2003·The Plant Journal : for Cell and Molecular Biology·Fiona MurrayFrank Gubler
Apr 12, 2003·Progress in Lipid Research·Hubert Schaller
Apr 20, 2004·Australian Veterinary Journal·D R DaviesW G Guilford
May 7, 2004·Development·Ana Margarida PradoJosé A Feijó
Jun 17, 2004·The Journal of Biological Chemistry·Fouad Lemtiri-Chlieh, Gerald A Berkowitz
Jun 19, 2004·BMC Genomics·Sheila Podell, Michael Gribskov
Jun 25, 2004·Nucleic Acids Research·Matti Kankainen, Liisa Holm
Jul 1, 2004·FEBS Letters·Lara DonaldsonKatherine Denby
Sep 18, 2004·Plant Physiology·Philip ZimmermannWilhelm Gruissem
Sep 21, 2004·Annual Review of Plant Biology·Tai-Ping Sun, Frank Gubler
Sep 24, 2004·Phytochemistry·Russell P Newton, Christopher J Smith
Nov 13, 2004·Genome Biology·David Honys, David Twell
Apr 23, 2005·Annals of Botany·Christoph Plieth
Feb 8, 2006·The Plant Journal : for Cell and Molecular Biology·Frans J M Maathuis
Jul 18, 2006·Nucleic Acids Research·Iain W ManfieldDavid R Westhead

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Citations

Nov 12, 2013·BMC Biotechnology·Janet I WheelerHelen R Irving
Dec 11, 2013·Molecular Genetics and Genomics : MGG·Yijun Wang, Dexiang Deng
Nov 30, 2013·Plant Physiology and Biochemistry : PPB·Hamad Abu ZahraHiroshi Yamagata
Mar 23, 2013·Journal of Proteomics·Ludivine ThomasChris Gehring
Dec 15, 2010·Plant Signaling & Behavior·Marshall KeysterNdiko Ludidi
Jun 19, 2013·Plant Physiology and Biochemistry : PPB·Małgorzata Pietrowska-Borek, Katarzyna Nuc
May 14, 2016·Cell Communication and Signaling : CCS·Lara DonaldsonChristoph Gehring
Mar 7, 2019·Journal of Experimental Botany·Claudio StasollaAbir U Igamberdiev
Feb 29, 2020·Journal of Experimental Botany·Phan T T HoaiCaitlin S Byrt
Oct 18, 2018·Frontiers in Plant Science·Brygida ŚwieżawskaAdriana Szmidt-Jaworska
Apr 28, 2021·Plant Physiology and Biochemistry : PPB·Huai-Na GaoYuan-Yuan Li

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