Jan 13, 2014

Global Epistasis Makes Adaptation Predictable Despite Sequence-Level Stochasticity

BioRxiv : the Preprint Server for Biology
Sergey KryazhimskiyMichael M Desai

Abstract

Epistasis can make adaptation highly unpredictable, rendering evolutionary trajectories contingent on the chance effects of initial mutations. We used experimental evolution in Saccharomyces cerevisiae to quantify this effect, finding dramatic differences in adaptability between 64 closely related genotypes. Despite these differences, sequencing of 105 evolved clones showed no significant effect of initial genotype on future sequence-level evolution. Instead, reconstruction experiments revealed a consistent pattern of diminishing returns epistasis. Our results suggest that many beneficial mutations affecting a variety of biological processes are globally coupled: they interact strongly, but only through their combined effect on fitness. Sequence-level adaptation is thus highly stochastic. Nevertheless, fitness evolution is strikingly predictable because differences in adaptability are determined only by global fitness-mediated epistasis, not by the identity of individual mutations.

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Mentioned in this Paper

Patterns
Saccharomyces cerevisiae allergenic extract
Clone
Sequencing
Adaptation
Saccharomyces cerevisiae
Genotype Determination
Orientation (spatial)
Clone Cells
Biological Evolution

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