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GRIDSS, PURPLE, LINX: Unscrambling the tumor genome via integrated analysis of structural variation and copy number

bioRxiv

Sep 25, 2019

Daniel L CameronPeter Priestley

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Abstract

We have developed a novel, integrated and comprehensive purity, ploidy, structural variant and copy number somatic analysis toolkit for whole genome sequencing data of paired tumor/normal samples. We show that the combination of using GRIDSS for somatic structural variant calling and PU...read more

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Anatomy, Regional
Classification
Gene Rearrangement
Genome
Membrane Fusion
Neoplasms
Virus
Structure
Chromosome Structures
Analysis
44
8
Paper Details
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GRIDSS, PURPLE, LINX: Unscrambling the tumor genome via integrated analysis of structural variation and copy number

bioRxiv

Sep 25, 2019

Daniel L CameronPeter Priestley

DOI: 10.1101/781013

Abstract

We have developed a novel, integrated and comprehensive purity, ploidy, structural variant and copy number somatic analysis toolkit for whole genome sequencing data of paired tumor/normal samples. We show that the combination of using GRIDSS for somatic structural variant calling and PU...read more

Mentioned in this Paper

Anatomy, Regional
Classification
Gene Rearrangement
Genome
Membrane Fusion
44
8
Paper Details
References
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  • Citations
  • finger pointing at paper

    References currently unavailable

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