Hymenobacter rufus sp. nov., a bacterium isolated from soil

International Journal of Systematic and Evolutionary Microbiology
Jeong-Eun OhnHee-Young Jung

Abstract

A bacterial strain, S1-2-2-6T, was isolated from a soil sample collected in Jeollabuk-do province, Republic of Korea. Cells of this strain were observed to be Gram-stain-negative, short and rod-shaped, and colonies were red to pink in colour. Analysis of 16S rRNA gene sequences identified this strain as representing a member of the genus Hymenobacter in the family Cytophagaceae, with the highest levels of sequence similarity being observed in relation to Hymenobacter terrae DG7AT (98.2 %), Hymenobacter rubidus DG7BT (97.9 %), Hymenobacter soli PB17T (97.7 %), and Hymenobacter daeguensis 16F3Y-2T (97.3 %). Growth of S1-2-2-6T was observed at 4-30 °C, pH 6-8 and in the presence of 0-0.5 % NaCl. The predominant respiratory quinone of this strain was menaquinone-7, the major fatty acids were C15 : 0 iso, C15 : 0 anteiso, and Summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), and the major polar lipid was phosphatidylethanolamine. The genomic DNA G+C content of S1-2-2-6T was 60.7 mol%. DNA-DNA hybridization experiments with H. terrae, H. rubidus, H. soli and H. daeguensisresulted in relatedness values of 35.9 and 38.4 %, 34.2 and 30.4 %, 28.3 and 33.1 %, and 23.5 and 27.9 %, respectively. These DNA-DNA hybridization results, in addition to s...Continue Reading

References

Jan 1, 1991·Journal of Bacteriology·W G WeisburgD J Lane
Jul 1, 1987·Molecular Biology and Evolution·N Saitou, M Nei
Jan 1, 1981·Journal of Molecular Evolution·J Felsenstein
Feb 1, 1994·Veterinary Microbiology·K MohanA Pawandiwa
Apr 5, 2002·International Journal of Systematic and Evolutionary Microbiology·Sandra BuczolitsHans-Jürgen Busse
Jun 1, 1936·Journal of Bacteriology·R P Tittsler, L A Sandholzer
Nov 1, 1940·Journal of Bacteriology·R Y Stanier
Nov 4, 2006·International Journal of Systematic and Evolutionary Microbiology·Leonid N TenSung-Taik Lee
Apr 10, 2008·International Journal of Systematic and Evolutionary Microbiology·Kyoung-Ho KimSung-Taik Lee
Sep 19, 2012·Antonie van Leeuwenhoek·Gundlapally S N Reddy, Ferran Garcia-Pichel
Aug 3, 2013·International Journal of Systematic and Evolutionary Microbiology·Ji Young KangKwang Yeop Jahng
Jan 16, 2014·International Journal of Systematic and Evolutionary Microbiology·Long JinHee-Mock Oh
Jan 13, 2015·Current Microbiology·Sathiyaraj SrinivasanMyung Kyum Kim
Jan 27, 2016·Antonie van Leeuwenhoek·Jae-Jin LeeMyung Kyum Kim
Mar 24, 2016·Molecular Biology and Evolution·Sudhir KumarKoichiro Tamura
Dec 23, 2016·International Journal of Systematic and Evolutionary Microbiology·Seok-Hwan YoonJongsik Chun
Jan 10, 2017·Frontiers in Microbiology·Richard L HahnkeMarkus Göker
Jan 27, 2017·The Journal of Microbiology·Leonid N TenHee-Young Jung
Jul 1, 1985·Evolution; International Journal of Organic Evolution·Joseph Felsenstein

❮ Previous
Next ❯

Citations

May 24, 2019·International Journal of Systematic and Evolutionary Microbiology·Guang-Da FengHong-Hui Zhu
Jan 22, 2020·International Journal of Systematic and Evolutionary Microbiology·Chong WangZong-Jun Du
Jan 29, 2019·Antonie van Leeuwenhoek·Leonid N TenHee-Young Jung
Jan 28, 2022·International Journal of Systematic and Evolutionary Microbiology·Ya ChenJianli Zhang

❮ Previous
Next ❯

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.

Related Papers

International Journal of Systematic and Evolutionary Microbiology
Soo Jeong LimHee-Young Jung
International Journal of Systematic and Evolutionary Microbiology
Nabil ElderinyHee-Young Jung
Archives of Microbiology
Leonid N TenHee-Young Jung
© 2022 Meta ULC. All rights reserved