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Identifying structural variants using linked-read sequencing data

Bioinformatics

Nov 8, 2017

Rebecca ElyanowBenjamin J Raphael

Abstract

Structural variation, including large deletions, duplications, inversions, translocations, and other rearrangements, is common in human and cancer genomes. A number of methods have been developed to identify structural variants from Illumina short-read sequencing data. However, reliable...read more

Mentioned in this Paper

Computer Software
Repetitive Region
Genome
Gene Deletion
Nucleic Acid Sequencing
Bio-Informatics
Genomics
Sequencing
Nuclear Translocation
DNA Barcoding, Taxonomic
9
101
Paper Details
References
  • References33
  • Citations5
1234
  • References33
  • Citations5
1

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Identifying structural variants using linked-read sequencing data

Bioinformatics

Nov 8, 2017

Rebecca ElyanowBenjamin J Raphael

PMID: 29112732

DOI: 10.1093/bioinformatics/btx712

Abstract

Structural variation, including large deletions, duplications, inversions, translocations, and other rearrangements, is common in human and cancer genomes. A number of methods have been developed to identify structural variants from Illumina short-read sequencing data. However, reliable...read more

Mentioned in this Paper

Computer Software
Repetitive Region
Genome
Gene Deletion
Nucleic Acid Sequencing
Bio-Informatics
Genomics
Sequencing
Nuclear Translocation
DNA Barcoding, Taxonomic
9
101

Similar Papers Found In These Feeds

Chromosomal Translocation

Chromosomal Translocation occur when regions on two chromosomes breaks and swaps places or when a region is attached to another chromosome. Discover the latest research on Chromosomal Translocation here.

Comparative Sequencing

Inter/Intra-Species: Comparative Sequencing describes the sequencing techniques that compare between and within species genomes. Discover the latest research on comparative sequencing of inter/intra-species here.

Related Papers

BMC Genomics

Discovery of large genomic inversions using long range information

BMC GenomicsJanuary 12, 2017
Marzieh Eslami RasekhCan Alkan
BMC Bioinformatics

Reconstructing cancer genomes from paired-end sequencing data

BMC BioinformaticsMay 2, 2012
Layla OesperBenjamin J Raphael
Paper Details
References
  • References33
  • Citations5
1234
  • References33
  • Citations5
1
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